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5-CFDA

Alias: 5CFDA5-CFDA 5 CFDA CFDA 5 CFDA5CFDA-5
Cat No.:V9635 Purity: ≥98%
5-CFDA is a common aliphatic fluorescein series.
5-CFDA
5-CFDA Chemical Structure CAS No.: 79955-27-4
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
50mg
Other Sizes

Other Forms of 5-CFDA:

  • 6-CFDA
  • 5(6)-CFDA
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
5-CFDA is a common aliphatic fluorescein series. CFDA can diffuse freely within cells and is hydrolyzed by intracellular non-specific lipases to generate carboxyfluorescein (CF). The CF-containing moiety carries an extra negative charge compared to the fluorescein dye, allowing it to be better retained in cells.
Biological Activity I Assay Protocols (From Reference)
ln Vitro
5-CFDA, Ingredients for the Working Solution 1. Add 10 mM 5-CFDA to DMSO to create a stock solution. Consider dissolving 1 milligram of 5-CFDA in 0.2172 mL of DMSO. It is suggested that the 5-CFDA storage solution be separated into smaller portions and kept at either -20°C or 2. One can prepare a 1-10 μM 5-CFDA working solution by loading the preset working solution into a storage solution that has been pre-prepared with either PBS or serum-free cell culture medium. Please make sure the 5-CFDA working solution is ready for usage by adjusting its concentration to suit the specific circumstances. Staining cells 1. Preparing the cell: Cells suspended: Using centrifugation, gather the cells, add PBS, and wash twice for five minutes each. Adherent cells: throw away the culture media, let the cells be broken down by trypsin, centrifuge, and then throw away the supernatant. Finally, add PBS and wash the cells twice, each for five minutes. 2. Work with 1 mL of the 5-CFDA working solution and centrifuge for 15 minutes. 3. Discard after 3–4 minutes at 4°C in a centrifuge at 400 g. 4. Wash the cells twice with PBS, giving them five minutes between washes. Using a flow cytometer or fluorescence microscope, resuspend the cells in 1 milliliter of serum-free or PBS and observe. Notifications 1. 5- It is advised to keep CFDA storage solution in the dark at -20°C or -80°C after aliquots and to steer clear of frequent freezing and thawing. It survives for one month at -20°C and six months at -80°C. 2. Could you please modify 5-CFDA to reflect the current situation? 3. The use of this product in clinical diagnosis or treatment, or in the production of food or medication, is strictly prohibited and should only be limited to scientific study conducted by qualified experts. Kindly put on a lab coat and disposable gloves for your own health and safety.
References

[1]. A novel nonradioactive CFDA assay to monitor the cellular immune response in myeloid leukemia. Immunobiology. 2013 Apr;218(4):548-53.

[2]. Assessment of fluorescein-based fluorescent dyes for tracing Neotyphodium endophytes in planta. Mycologia. 2013 Jan-Feb;105(1):221-9.

[3]. Bone marrow-derived endothelial progenitor cells are involved in aneurysm repair in rabbits. J Clin Neurosci. 2012 Sep;19(9):1283-6.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C25H16O9
Molecular Weight
460.39
Exact Mass
460.079
CAS #
79955-27-4
Related CAS #
6-CFDA;3348-03-6;5(6)-CFDA;124387-19-5
PubChem CID
133314
Appearance
Off-white to yellow solid powder
Density
1.6±0.1 g/cm3
Boiling Point
693.1±55.0 °C at 760 mmHg
Flash Point
241.9±25.0 °C
Vapour Pressure
0.0±2.3 mmHg at 25°C
Index of Refraction
1.702
LogP
2.4
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
9
Rotatable Bond Count
5
Heavy Atom Count
34
Complexity
828
Defined Atom Stereocenter Count
0
InChi Key
WPUZGNPQMIWOHE-UHFFFAOYSA-N
InChi Code
InChI=1S/C25H16O9/c1-12(26)31-15-4-7-19-21(10-15)33-22-11-16(32-13(2)27)5-8-20(22)25(19)18-6-3-14(23(28)29)9-17(18)24(30)34-25/h3-11H,1-2H3,(H,28,29)
Chemical Name
3',6'-Diacetyloxy-3-oxospiro[2-benzofuran-1,9'-xanthene]-5-carboxylic acid
Synonyms
5CFDA5-CFDA 5 CFDA CFDA 5 CFDA5CFDA-5
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ≥ 100 mg/mL (~217.21 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (5.43 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (5.43 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (5.43 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.1721 mL 10.8604 mL 21.7207 mL
5 mM 0.4344 mL 2.1721 mL 4.3441 mL
10 mM 0.2172 mL 1.0860 mL 2.1721 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
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  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT03282266 COMPLETED Procedure: PADN
Procedure: Sham operation
Pulmonary Arterial Hypertension Nanjing First Hospital, Nanjing Medical University 2018-01-18 Not Applicable
NCT02991872 COMPLETED Procedure: Blood draw Virus Diseases GlaxoSmithKline 2016-12-16 Phase 4
NCT05104801 UNKNOWN STATUS Drug: sitravatinib
Drug: tislelizumab
Melanoma Peking University Cancer Hospital & Institute 2021-11 Phase 2
NCT05877001 RECRUITING Drug: Tislelizumab
Drug: Regorafenib
Other: HAIC
Colorectal Liver Metastases Peking University Cancer Hospital & Institute 2023-05-30 Phase 2
NCT03156985 COMPLETED Type 2 Diabetes Mellitus AstraZeneca 2017-08-16
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