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Bay 65-1942

Alias: BAY65-1942 free base; BAY 65-1942; BAY-65-1942; BAY65-1942; BAY 651942; BAY-651942; BAY651942
Cat No.:V4190 Purity: ≥98%
BAY65-1942 is a novel, potent and selective ATP-competitive inhibitor ofIKKβ.
Bay 65-1942
Bay 65-1942 Chemical Structure CAS No.: 600734-02-9
Product category: IκB IKK
This product is for research use only, not for human use. We do not sell to patients.
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Other Forms of Bay 65-1942:

  • Bay 65-1942 HCl
  • Bay 65-1942 R-isomer
Official Supplier of:
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Top Publications Citing lnvivochem Products
Purity & Quality Control Documentation

Purity: ≥98%

Product Description

BAY65-1942 is a novel, potent and selective ATP-competitive inhibitor of IKKβ. IKKβ kinase activity is a specific target. Inflammation caused by acute ischemia-reperfusion injury is reduced by IKKbeta inhibition. Comparing animals pretreated with Bay 65-1942 (n=3) to those not treated before IR, the difference in CK-MB levels was significant 14,170 ±3,219 units, P<0.05 vs. vehicle).

Biological Activity I Assay Protocols (From Reference)
Targets
IKKβ
ln Vitro
Compared to animals receiving a vehicle, the size of the left ventricular infarct is significantly reduced when Bay 65-1942 is administered before ischemia. Animals receiving vehicles have a significantly higher infarct-to-area at risk (AAR) ratio than sham animals (70.7±3.4 vs. 5.8±3.4%, P<0.05). Treatment with Bay 65-1942 at each time point significantly lowers this ratio (prior to ischemia 42.7±4.1%, at reperfusion 42.7±7.5%, 2 hours after reperfusion 29.4±5.2%; each group P<0.05 vs. vehicle). The CK-MB levels in the animals pretreated with Bay 65-1942 (n=3) were significantly lower than those in the control group before IR (14,170 ±3,219 units, P<0.05 vs. vehicle)[1].
ln Vivo
Utilizing inhibitors of MEK (AZD6244) and IKK (BAY 65-1942) at their IC50 concentrations, as determined by a 48-hour MTS assay, is sufficient for inhibiting kinase activity. AZD6244 (5 µM), BAY 65-1942 (10 µM), or a mixture of these inhibitors at the same concentrations are applied to MYL-R cells for 24 hours. At the dose combination (5 µM AZD6244+10 µM BAY 65-1942), which correlates with IC75 (CI = 0.48±0.01), AZD6244 and BAY 65-1942 show synergistic inhibition of cell viability. Additionally, the software's reported IC50 (CI = 0.56±0.09) and IC90 (CI = 0.46±0.02) dose combinations show synergism (CI values are the mean of three independent experiments, standard deviation). Comparing treated cells with DMSO and those treated with AZD6244 and BAY 65-1942, the activation of caspase 3/7 is increased by 2 and 1.3 times, respectively. Caspase 3/7 activity is increased 3.2-fold when AZD6244 and BAY 65-1942 are administered together[2].
Cell Assay
The viability of the cells is assessed by seeding 4×104 MYL-R cells per well in a 96-well plate with 100 µL of RPMI growth medium that has been enhanced with kinase inhibitors. At 24 and 48 hours, growth media and kinase inhibitors are replaced. Each well receives 20 µL of MTS assay reagent. The plate is put back in the incubator for about an hour, after which the absorbance at 490 nm is measured. Cells are grown and assessed for combination index (CI) experiments. Cells are treated with a series of three-fold dilutions of either AZD6244 or BAY 65-1942 (10 µM) alone or in combination while keeping a constant ratio of 1:2, as appropriate, in order to study the dose-effects of each drug. To determine CI values, cell viability test results are examined. The average of three separate experiments' CI values is used[2].
Animal Protocol
Mice: Mice are given 30 minutes of cardiac ischemia followed by different lengths of reperfusion to study the effects of IKKβ inhibition on myocardial IR injury. At the proper dosing intervals, a 5-mg/kg intraperitoneal injection of Bay 65-1942 is given. Non-treatment groups are given a 10% cremaphor in water vehicle. Depending on the treatment group, Bay 65-1942 is administered either before ischemia, during reperfusion, or two hours after reperfusion injury. Infarct size in the sham, vehicle, and each treatment group is assessed 24 hours after reperfusion injury. In animals pretreated with Bay 65-1942, serum creatine kinase-muscle-brain fraction (CK-MB) levels are assessed 1 hour after reperfusion to confirm myocardial injury.
References

[1]. IKKbeta inhibition attenuates myocardial injury and dysfunction following acute ischemia-reperfusion injury. Am J Physiol Heart Circ Physiol. 2007 Oct;293(4):H2248-53.

[2]. Application of multiplexed kinase inhibitor beads to study kinome adaptations in drug-resistant leukemia. PLoS One. 2013 Jun 24;8(6):e66755.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C22H25N3O4
Molecular Weight
395.4516
Exact Mass
395.185
Elemental Analysis
C, 66.82; H, 6.37; N, 10.63; O, 16.18
CAS #
600734-02-9
Related CAS #
600734-06-3 (HCl salt); 758683-21-5 (BAY65-1942 R-isomer)
PubChem CID
135454904
Appearance
Solid powder
Density
1.286g/cm3
LogP
4.238
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
5
Heavy Atom Count
29
Complexity
586
Defined Atom Stereocenter Count
1
SMILES
O=C1OCC2=C([C@H]3CNCCC3)C=C(C4=C(O)C=CC=C4OCC5CC5)N=C2N1
InChi Key
IGJVFGZEWDGDOO-CQSZACIVSA-N
InChi Code
InChI=1S/C22H25N3O4/c26-18-4-1-5-19(28-11-13-6-7-13)20(18)17-9-15(14-3-2-8-23-10-14)16-12-29-22(27)25-21(16)24-17/h1,4-5,9,13-14,23,26H,2-3,6-8,10-12H2,(H,24,25,27)/t14-/m1/s1
Chemical Name
7-[2-(cyclopropylmethoxy)-6-hydroxyphenyl]-5-[(3S)-piperidin-3-yl]-1,4-dihydropyrido[2,3-d][1,3]oxazin-2-one
Synonyms
BAY65-1942 free base; BAY 65-1942; BAY-65-1942; BAY65-1942; BAY 651942; BAY-651942; BAY651942
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.5288 mL 12.6438 mL 25.2876 mL
5 mM 0.5058 mL 2.5288 mL 5.0575 mL
10 mM 0.2529 mL 1.2644 mL 2.5288 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • Enter 10 in the Concentration box and choose the correct unit (mM)
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  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
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  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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