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BAY1082439

Alias: BAY10-82439 BAY-10-82439 BAY 10-82439
Cat No.:V8086 Purity: ≥98%
BAY1082439 is an orally bioactive, selective PI3Kα/β/δ inhibitor.
BAY1082439
BAY1082439 Chemical Structure CAS No.: 1375469-38-7
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
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Product Description
BAY1082439 is an orally bioactive, selective PI3Kα/β/δ inhibitor. BAY1082439 can also inhibit the mutant form of PIK3CA, and BAY1082439 has a strong effect on inhibiting the growth of prostate cancer with Pten loss.
Biological Activity I Assay Protocols (From Reference)
ln Vitro
BAY1082439 is a highly selective PI3Kα/α balance inhibitor. BAY1082439 exhibits an IC50 ratio of 1:3 in PI3Kα (4.9 nM) versus PI3Kα (15.0 nM) biochemical studies and is over 1000-fold selective for mTOR kinase [1]. BAY1082439 (0.1-1 μM; 72 hours) effectively inhibits PTEN-deficient prostate cancer cells, surpassing specific inhibitors of PI3Kα and/or PI3Kβ [2].
ln Vivo
The oral medication BAY1082439 (75 mg/kg; once daily for 4 weeks) is useful in stopping the progression of prostate cancer that lacks PTEN [2].
Cell Assay
Cell viability assay[2]
Cell Types: PC3 and LNCaP cells (PTEN-deleted human prostate cancer cell line)
Tested Concentrations: 0.1, 0.33, 1, 3.3, 10 μM
Incubation Duration: 72 hrs (hours)
Experimental Results: Effective inhibition of cell growth by blocking G1 /S cell cycle transition and by inducing apoptosis.
Animal Protocol
Animal/Disease Models: Pten conditional knockout mouse model (Pb-Cre+; PtenL/L, CP model) [2]
Doses: 75 mg/kg
Route of Administration: Po; one time/day for 4 weeks
Experimental Results: Tumor size and P- AKT staining was Dramatically diminished, the luminal structure was close to normal, and Ki67-positive cells were Dramatically diminished. Dramatically inhibits the growth of human prostate cancer.
References

[1]. Abstract 2799: BAY 1082439, a highly selective and balanced PI3Kα/β inhibitor demonstrated potent activity in tumors with activated PI3Kα and loss-of-function of PTEN. Abstract nr 2799. doi:1538-7445.AM2012-2799.

[2]. Co-Targeting the Cell Intrinsic and Microenvironment Pathways of Prostate Cancer by PI3Kα/β/δ inhibitor BAY1082439. Mol Cancer Ther. 2018 Oct;17(10):2091-2099.

Additional Infomation
PI3K Alpha/Beta Inhibitor BAY1082439 is an orally bioavailable inhibitor of the class I phosphoinositide 3-kinase (PI3K) alpha and beta isoforms with potential antineoplastic activity. PI3K alpha/beta inhibitor BAY1082439 selectively inhibits both PI3K alpha, including mutated forms of PIK3CA, and PI3K beta in the PI3K/Akt/mTOR pathway, which may result in tumor cell apoptosis and growth inhibition in PI3K-expressing and/or PTEN-driven tumor cells. By specifically targeting class I PI3K alpha and beta, this agent may be more efficacious and less toxic than pan PI3K inhibitors. Dysregulation of the PI3K/Akt/mTOR pathway is frequently found in solid tumors and results in increased tumor cell growth, survival, and resistance to chemotherapy and radiotherapy. PIK3CA, one of the most highly mutated oncogenes, encodes the p110-alpha catalytic subunit of the class I PI3K. PTEN, a tumor suppressor protein and negative regulator of PI3K activity, is often mutated in a variety of cancer cells.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C25H30N6O5
Molecular Weight
494.552
Exact Mass
494.227
CAS #
1375469-38-7
PubChem CID
135905473
Appearance
White to off-white solid powder
Density
1.4±0.1 g/cm3
Index of Refraction
1.683
LogP
-0.2
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
8
Rotatable Bond Count
7
Heavy Atom Count
36
Complexity
1010
Defined Atom Stereocenter Count
1
SMILES
O1CCN(CC1)C[C@@H](COC1C=CC2C(C=1OC)=N/C(=N\C(C1=CC=CN=C1C)=O)/N1CCNC1=2)O
InChi Key
QJTLLKKDFGPDPF-QGZVFWFLSA-N
InChi Code
InChI=1S/C25H30N6O5/c1-16-18(4-3-7-26-16)24(33)29-25-28-21-19(23-27-8-9-31(23)25)5-6-20(22(21)34-2)36-15-17(32)14-30-10-12-35-13-11-30/h3-7,17,27,32H,8-15H2,1-2H3/t17-/m1/s1
Chemical Name
N-[8-[(2R)-2-hydroxy-3-morpholin-4-ylpropoxy]-7-methoxy-2,3-dihydro-1H-imidazo[1,2-c]quinazolin-5-ylidene]-2-methylpyridine-3-carboxamide
Synonyms
BAY10-82439 BAY-10-82439 BAY 10-82439
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~5 mg/mL (~10.11 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.0220 mL 10.1102 mL 20.2204 mL
5 mM 0.4044 mL 2.0220 mL 4.0441 mL
10 mM 0.2022 mL 1.0110 mL 2.0220 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT01728311 COMPLETED Drug: BAY1082439 Neoplasms Bayer 2012-11-21 Phase 1
Biological Data
  • PI3Kα/β dual-balanced inhibitor BAY1082439 inhibits proliferation of PTEN-null prostate cells in vitro (A) LNCaP and PC3 cells were treated with BAY1082439, TGX-221 or BYL-719 in different concentrations and the inhibition effects on cell growth were analyzed. (B) PC3-WT and PC3-PTEN null cells were treated with BAY1082439 at different concentrations and the effects on cell growth were analyzed. (C) PC3 cells were treated with 1μM TGX-221 or BAY1082439 and the effects on P-AKT (S473) and P-S6 (Ser 240/244) levels were analyzed by Western blot analysis; the fold change in P-AKT (S473) was determined by densitometry analysis using total AKT as loading control. (D) Cap2 and Cap8 cells were treated with BAY1082439 or TGX-221, P-AKT (S473) and P-ERK1/2 (Thr 202/204) levels were analyzed. (E) LNCaP and PC3 cells were treated with BAY1082439 or TGX-221+BYL-719 in different concentrations and cell viability was analyzed. For in vitro studies, each data point had 3 replicates and each experiment was repeated at least 3 times. Student’s t-test was used for data evaluation. **, p < 0.01. BYL-719: PI3Kα inhibitor, TGX-221: PI3Kβ inhibitor.[2]. Yongkang Zou, et al. Co-Targeting the Cell Intrinsic and Microenvironment Pathways of Prostate Cancer by PI3Kα/β/δ inhibitor BAY1082439. Mol Cancer Ther. 2018 Oct;17(10):2091-2099.
  • PI3Kα/β dual-balanced inhibitor BAY1082439 inhibits proliferation of PTEN-null prostate cells in vivo (A) Experimental setup, (B) HE and immunohistochemistry (IHC) staining, (C) Ki67 index of prostate tumors from mice treated with BAY1082439 (n=6) or vehicle (n=6). (D) The growth curves of PC3 xenograft tumors treated with vehicle (n=8) or BAY1082439 (n=8). Student’s t-test was used for data evaluation. **, p < 0.01.[2]. Yongkang Zou, et al. Co-Targeting the Cell Intrinsic and Microenvironment Pathways of Prostate Cancer by PI3Kα/β/δ inhibitor BAY1082439. Mol Cancer Ther. 2018 Oct;17(10):2091-2099.
  • BAY1082439 effectively prevents EMT-mediated invasive carcinoma (A) Six-week-old CPK mice were treated with vehicle (n=3) or BAY1082439 (n=3). (B) Average prostate weight was analyzed. (C) HE and IHC staining of CPK prostate tumors treated with BAY1082439 or vehicle. (D) IHC staining of E-cadherin and Vimentin from CPK prostate tumors treated with BAY1082439 or vehicle. Data represent mean ± SD. Student’s t-test was used. *, p < 0.05, **, p < 0.01.[2]. Yongkang Zou, et al. Co-Targeting the Cell Intrinsic and Microenvironment Pathways of Prostate Cancer by PI3Kα/β/δ inhibitor BAY1082439. Mol Cancer Ther. 2018 Oct;17(10):2091-2099.
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