Size | Price | Stock | Qty |
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5mg |
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10mg |
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25mg |
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50mg |
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100mg |
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250mg |
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Other Sizes |
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Targets |
p97 ( IC50 = 9 nM )
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ln Vitro |
In AML cells, CB-5339 (0-1.6 μM; 24-48 hours) produces an accumulation of polyubiquitin proteins and triggers the unfolded protein response (UPR)[2].
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ln Vivo |
In an MLL-AF9-driven patient-derived xenograft (PDX) AML mouse model, CB-5339 (90 mg/kg for oral administration) reduces bone marrow leukemic infiltration and increases the duration of mice's survival[2].
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Animal Protocol |
Animal Model: Patient-derived xenograft (PDX) AML model in male C57BL/6 mice driven by MLL-AF9[2]
Dosage: 90 mg/kg Administration: oral gavage (p.o.) Result: Reduced leukemic cell infiltration and circulation in the bone marrow as a result. |
References |
Molecular Formula |
C24H24N6O
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Molecular Weight |
412.49
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Exact Mass |
412.2
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Elemental Analysis |
C, 69.88; H, 5.86; N, 20.37; O, 3.88
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CAS # |
1863952-15-1
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PubChem CID |
122685543
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Appearance |
Off-white to yellow solid powder
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Hydrogen Bond Donor Count |
3
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Hydrogen Bond Acceptor Count |
5
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Rotatable Bond Count |
5
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Heavy Atom Count |
31
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Complexity |
625
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Defined Atom Stereocenter Count |
0
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SMILES |
C1=C(C=CC=C1)CNC1NC(N2C(C)=CC3C(=CC=CC2=3)C(N)=O)=NC2C=1CCCN=2
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InChi Key |
XDHFSLWWYBVSLN-UHFFFAOYSA-N
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InChi Code |
InChI=1S/C24H24N6O/c1-15-13-19-17(21(25)31)9-5-11-20(19)30(15)24-28-22-18(10-6-12-26-22)23(29-24)27-14-16-7-3-2-4-8-16/h2-5,7-9,11,13H,6,10,12,14H2,1H3,(H2,25,31)(H2,26,27,28,29)
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Chemical Name |
1-[4-(benzylamino)-5,6,7,8-tetrahydropyrido[2,3-d]pyrimidin-2-yl]-2-methylindole-4-carboxamide
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Synonyms |
CB-5339; CB5339; CB 5339; p97-IN-1; p97 IN 1
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HS Tariff Code |
2934.99.9001
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Storage |
Powder -20°C 3 years 4°C 2 years In solvent -80°C 6 months -20°C 1 month |
Shipping Condition |
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
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Solubility (In Vitro) |
DMSO : ~100 mg/mL ( ~242.4 mM )
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Solubility (In Vivo) |
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.
Injection Formulations
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution → 50 μL Tween 80 → 850 μL Saline)(e.g. IP/IV/IM/SC) *Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution. Injection Formulation 2: DMSO : PEG300 :Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO → 400 μLPEG300 → 50 μL Tween 80 → 450 μL Saline) Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO → 900 μL Corn oil) Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals). View More
Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO → 900 μL (20% SBE-β-CD in saline)] Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium) Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals). View More
Oral Formulation 3: Dissolved in PEG400  (Please use freshly prepared in vivo formulations for optimal results.) |
Preparing Stock Solutions | 1 mg | 5 mg | 10 mg | |
1 mM | 2.4243 mL | 12.1215 mL | 24.2430 mL | |
5 mM | 0.4849 mL | 2.4243 mL | 4.8486 mL | |
10 mM | 0.2424 mL | 1.2122 mL | 2.4243 mL |
*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.
Calculation results
Working concentration: mg/mL;
Method for preparing DMSO stock solution: mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.
Method for preparing in vivo formulation::Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.
(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
(2) Be sure to add the solvent(s) in order.
NCT Number | Recruitment | interventions | Conditions | Sponsor/Collaborators | Start Date | Phases |
NCT04372641 | Withdrawn | Drug: p97 Inhibitor CB-5339 Tosylate | Aggressive Non-Hodgkin Lymphoma Indolent Non-Hodgkin Lymphoma |
National Cancer Institute NCI |
June 18, 2020 | Phase 1 |
NCT04402541 | Completed | Drug: CB-5339 | Acute Myeloid Leukemia, in Relapse Myelodysplastic Syndromes |
Cleave Therapeutics,Inc. | June 8, 2020 | Phase 1 |
An in vivo shRNA screen identifies VCP as an AML dependency. [2].Targeting acute myeloid leukemia dependency on VCP-mediated DNA repair through a selective second-generation small-molecule inhibitor. Sci Transl Med. 2021 Mar 31;13(587):eabg1168. td> |
AML cell lines are preferentially sensitive to VCP inhibition. [2].Targeting acute myeloid leukemia dependency on VCP-mediated DNA repair through a selective second-generation small-molecule inhibitor. Sci Transl Med. 2021 Mar 31;13(587):eabg1168. td> |
VCP is a dependency in in vivo AML models and primary AML patient samples. [2].Targeting acute myeloid leukemia dependency on VCP-mediated DNA repair through a selective second-generation small-molecule inhibitor. Sci Transl Med. 2021 Mar 31;13(587):eabg1168. td> |
Inhibition of the nuclear function of VCP alters AML cell line viability through impairment of DNA repair. [2].Targeting acute myeloid leukemia dependency on VCP-mediated DNA repair through a selective second-generation small-molecule inhibitor. Sci Transl Med. 2021 Mar 31;13(587):eabg1168. td> |
VCP inhibition impairs ATM phosphorylation and downstream signaling, resulting in increased sensitivity to DNA-damaging agents. [2].Targeting acute myeloid leukemia dependency on VCP-mediated DNA repair through a selective second-generation small-molecule inhibitor. Sci Transl Med. 2021 Mar 31;13(587):eabg1168. td> |
Targeting VCP in AML through a second-generation VCP inhibitor: CB-5339. [2].Targeting acute myeloid leukemia dependency on VCP-mediated DNA repair through a selective second-generation small-molecule inhibitor. Sci Transl Med. 2021 Mar 31;13(587):eabg1168. td> |