Chidamide (Tucidinostat, HBI8000, CS 055)

Alias: HBI8000; HBI 8000; HBI-8000; CS055; CS-055; CS 055; Chidamide; Tucidinostat
Cat No.:V3843 Purity: ≥98%
Chidamide (CS-055, Tucidinostat, HBI-8000; trade name: Epidaza), is a potent and orally bioavailable benzamide-type histone deacetylase (HDAC) inhibitor with IC50s of 95, 160, 67 and 78 nM for HDAC1, HDAC2, HDAC3 and HDAC10, respectively.
Chidamide (Tucidinostat, HBI8000, CS 055) Chemical Structure CAS No.: 1616493-44-7
Product category: HDAC
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

Chidamide (CS-055, Tucidinostat, HBI-8000; trade name: Epidaza), is a potent and orally bioavailable benzamide-type histone deacetylase (HDAC) inhibitor with IC50s of 95, 160, 67 and 78 nM for HDAC1, HDAC2, HDAC3 and HDAC10, respectively. Chidamide is classified as an orphan drug in Japan and is approved by the Chinese FDA for the treatment of relapsed or refractory peripheral T-cell lymphoma (PTCL). It's only legal in China as of April 2015. The selective binding and inhibition of HDAC by chindamide causes the histone protein H3 to become more acetylated. Additionally, it suppresses the expression of signaling kinases in the MAPK/Ras and PI3K/Akt signaling pathways. In addition, it may cause cell cycle arrest and induce tumor cell apoptosis, which may stop the growth of tumor cells in tumor cells that are vulnerable to it. Research is being done on chidamide as a potential pancreatic cancer treatment. It is not, however, approved by the US FDA for the treatment of pancreatic cancer.

Biological Activity I Assay Protocols (From Reference)
Targets
HDAC3 (IC50 = 67 nM); HDAC10 (IC50 = 78 nM); HDAC1 (IC50 = 95 nM); HDAC2 (IC50 = 160 nM); HDAC11 (IC50 = 432 nM); HDAC8 (IC50 = 733 nM)
ln Vitro

Chidamide, at low nanomolar concentrations, inhibits both class IIb HDAC10 and class I HDACs 1-3. Both human PBMC and HeLa cervical adenocarcinoma cells exhibit a significant increase in histone H3 acetylation upon exposure to chidamide. Chidamide and MS-275 similarly inhibit the in vitro growth of most tumor cells, but not all of them, in the low micromolar concentration range, according to studies on cell growth inhibition carried out with 18 human-derived tumor cell lines. Nonetheless, normal cells from human fetal kidney (CCC-HEK) and liver (CCC-HEL) are significantly less toxic to chidamide and, to a lesser extent, MS-275, suggesting that normal cells and cancerous cells respond to chidamide differently in terms of cytotoxicity[1].

ln Vivo
Chidamide exhibits in vivo antitumor activity in xenografts of HCT-8 mice with colorectal carcinoma. Tumor size and weight are dose-dependently reduced by cidamide in the range of 12.5–50 mg/kg. When compared to the control medications 5-fluorouracil (5-FU, 20 mg/kg) and MS-275 (25 mg/kg, which was reported as the maximum tolerated dose in xenograft models), the efficacy of the 50 mg/kg dose is comparable to or greater. On the other hand, the tumor-bearing animals tolerate chidamide at the above doses well, while the control medications significantly reduce body weight[1].
Enzyme Assay
The Colorimetric HDAC Activity Assay kit's instructions are followed to detect HDAC activity. HDAC substrate and nuclear protein (50 μg) extract from leukemia cells are added to each reaction (100 μL). Chidamide (CS055) and MS-275 are added to the mixtures and incubated at 37°C for one hour in order to test the impact of HDACis. A microplate reader is used to measure the HDAC activities at 405 nm. The double-distilled water containing 10 μM Trichostatin A, a known strong HDACi, is used as a negative control and set to 0%, while the positive control (only nuclear extract and vehicle) is set to 100%.
Cell Assay
Chidamide is added to isolated PBMC effector cells in 6-well plates (6 x 106 cells/well) for varying durations of time (24-72 hours) at varying concentrations (0-400 nM).
Animal Protocol
Athymic nude mice (BALB/c-nu)
12.5-50 mg/kg
oral
References

[1]. Cancer Chemother Pharmacol . 2012 Apr;69(4):901-9.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C22H19FN4O2
Molecular Weight
390.41
Exact Mass
390.14920402
CAS #
1616493-44-7
Related CAS #
Tucidinostat-d4
Appearance
Solid
SMILES
C1=CC(=CN=C1)/C=C/C(=O)NCC2=CC=C(C=C2)C(=O)NC3=C(C=C(C=C3)F)N
InChi Key
SZMJVTADHFNAIS-BJMVGYQFSA-N
InChi Code
InChI=1S/C22H19FN4O2/c23-18-8-9-20(19(24)12-18)27-22(29)17-6-3-16(4-7-17)14-26-21(28)10-5-15-2-1-11-25-13-15/h1-13H,14,24H2,(H,26,28)(H,27,29)/b10-5+
Chemical Name
N-(2-amino-4-fluorophenyl)-4-[[[(E)-3-pyridin-3-ylprop-2-enoyl]amino]methyl]benzamide
Synonyms
HBI8000; HBI 8000; HBI-8000; CS055; CS-055; CS 055; Chidamide; Tucidinostat
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ≥ 41 mg/mL
Water: < 1 mg/mL
Ethanol: < 1 mg/mL
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (6.40 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (6.40 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (6.40 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


Solubility in Formulation 4: 1% CMC Na: 30mg/mL

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.5614 mL 12.8070 mL 25.6141 mL
5 mM 0.5123 mL 2.5614 mL 5.1228 mL
10 mM 0.2561 mL 1.2807 mL 2.5614 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT05140616 Recruiting Drug: Chidamide Safety and Efficacy The First Affiliated Hospital
of Soochow University
May 31, 2021 Phase 1
Phase 2
NCT05951855 Recruiting Drug: Selinexor
Drug: Chidamide
Acute Myeloid Leukemia
(Relapsed/Refractory)
The First Affiliated Hospital
of Soochow University
October 19, 2022 Phase 2
NCT05330364 Recruiting Drug: Chidamide
Drug: Cladribine
Acute Myeloid Leukemia Ge Zheng June 1, 2021 Phase 2
NCT05270200 Recruiting Drug: Azacitidine
Drug: Chidamide
Leukemia, Myeloid, Acute Zhujiang Hospital February 1, 2022 Phase 1
Phase 2
NCT04994210 Recruiting Drug: Sintilimab
Drug: Chidamide
Safety and Efficacy Sun Yat-sen University October 4, 2021 Phase 2
Biological Data
  • Chidamide

    Expression levels of MEG3 and methylation related genes in different stages of CML and in healthy donors and the methylation status of MEG3 in different stages of CML and in healthy donors.2018 Aug;34:61-75.

  • Chidamide

    Changes in mRNA and protein levels in CML blast cells after chidamide treatment.2018 Aug;34:61-75.

  • Chidamide

    Changes in mRNA and protein levels in CML blast cells after chidamide treatment.2018 Aug;34:61-75.

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