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Ganetespib (STA-9090)

Alias: STA-9090; Ganetespib; STA 9090; STA9090
Cat No.:V0875 Purity: ≥98%
Ganetespib (formerly STA-9090; STA 9090; STA9090), the active metabolite of STA-1474 (a prodrug of ganetespib), is a potent and triazolone-based small-molecule HSP90 (heat shock protein 90) inhibitor with potential anticancer activity.
Ganetespib (STA-9090)
Ganetespib (STA-9090) Chemical Structure CAS No.: 888216-25-9
Product category: HSP
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

Ganetespib (formerly STA-9090; STA 9090; STA9090), the active metabolite of STA-1474 (a prodrug of ganetespib), is a potent and triazolone-based small-molecule HSP90 (heat shock protein 90) inhibitor with potential anticancer activity. It inhibits HSP90 with an IC50 of 4 nM in OSA 8 cells, and induces apoptosis of OSA cells while normal osteoblasts are not affected. Ganetespib is being investigated for the treatment of various cancers such as Small Cell Lung Cancer, breast cancer, Acute Myeloid Leukaemia, and Myelodysplastic Syndrome.

Biological Activity I Assay Protocols (From Reference)
Targets
HSP90
ln Vitro
In genomically characterized NSCLC cell lines, genesetib induces apoptosis, suppresses downstream signaling, depletes receptor tyrosine kinases, and inhibits proliferation with IC50 values ranging from 2 to 30 nM. Additionally, in isogenic Ba/F3 pro-B cells that have been made IL-3 independent through the production of EGFR and ERBB2 mutants, genetecib is around 20 times more potent[1]. In vitro, genetecib is more effective than 17-allylamino-17-demethoxygeldanamycin (17-AAG), an ansamycin inhibitor, at causing the degradation of known Hsp90 client proteins. It also shows strong cytotoxicity in a variety of solid and hematologic tumor cell lines[2]. Strong HSP90 inhibitor genesetespib has been demonstrated to destroy canine tumor cell lines in vitro[3]. In the HEL92.1.7 cells, genesetib exhibits more potent or prolonged JAK/STAT inhibitory activity compared to P6 and 17-AAG[4].
ln Vivo
In NCI-H1975 xenografts, genetecib (125 mg/kg, IV) accumulates in tumors more than in normal tissues and has higher in vivo efficacy than 17-AAG without causing additional toxicity. It also slows proliferation and promotes apoptosis together with EGFR depletion[1]. (100, 125, 150 mg/kg, iv) significantly inhibits development and/or reverses tumor growth in solid and hematologic xenograft models of oncogene addiction, demonstrating strong anticancer efficacy[2].
Enzyme Assay
HSP90 binding assays[1]
Exponentially growing cells were processed in lysis buffer (20 mM HEPES, pH 7.4, 1 mM EDTA, 5 mM MgCl2, 100 mM KCl) and incubated with increasing concentrations of 17-AAG or ganetespib for 30 min at 4°C, and incubated with biotin-GM linked to Dynabeads MyOne Streptavidin T1 magnetic bead for 1 h at 4°C. Beads were washed three times in lysis buffer and heated for 5 min at 95°C in SDS–PAGE sample buffer (Invitrogen). Samples were resolved on 4-12% Bis-Tris gradient gel and Western blots were performed using an anti-HSP90 antibody.
Cell Assay
Cell proliferation assay[1]
Cell proliferation assays were performed using the CCK-8 colorimetric assay in at least duplicate samples according to the manufacturer’s specifications. IC50 values were calculated using Kaleidagraph or Graphpad Prism.
Western blots[1]
Whole-cell lysates were prepared as previously described (9). Protein concentrations were determined and equivalent amounts (20 μg) were subjected to SDS-PAGE on 4-12% bis-tris gradient gels (Invitrogen). The HSP27 antibody was from Enzo Life Sciences. p23 and HSP90αantibodies were from StressMarq.
Immunoprecipitation[1]
500 μg of whole cell lysate was immunoprecipitated with 2 μg of mouse anti-p23 monoclonal antibody conjugated with protein A Dynabeads. Proteins bound to p23 were resolved on 4-12% bis-tris gradient gels and Western blot was performed with an anti-HSP90 antibody.
Animal Protocol
Establishment and treatment of xenografts[1]
Female 7–8-week-old C.B-17 SCID mice were maintained under pathogen-free conditions. All procedures were approved by the Synta Pharmaceutical Institutional Animal Care and Use Committee. NCI-H1975 or HCC827 cells were cultured as above and 0.5 – 1×107 cells were mixed with 50% RPMI 1640/50% Matrigel and subcutaneously injected into the flanks of SCID mice. For efficacy studies, animals with 100-200 mm3 tumors were then randomized into treatments groups of eight. Tumor volumes (V) were calculated by the equation V = 0.5236×L×W×T (Length, width, and thickness). Animals were treated by intravenous bolus tail vein injection at 10 ml/kg with ganetespib formulated in 10/18 DRD (10% DMSO, 18% Cremophor RH 40, 3.6% dextrose and 68.4% water). As a measurement of in vivo efficacy, the relative size of treated and control tumors [(%T/C) value] was determined from the change in average tumor volumes of each drug-treated group relative to the vehicle-treated group, or itself in the case of tumor regression. Body weights were monitored daily. For biomarker studies, mice bearing NCI-H1975 xenografts were treated with either a single dose of vehicle or ganetespib, or with 5 daily doses of vehicle or ganetespib, in groups of 3 or 8, and harvested at various time points. Tumors were excised and flash frozen in liquid nitrogen for preparation of protein lysates or fixed in 10% neutral buffered formalin for immunohistochemistry.
Pharmacokinetic Analysis[1]
Female 7–8-week-old C.B-17 SCID mice bearing NCI-H1975 xenografts received a single intravenous (i.v.) dose slightly below the highest non-severely toxic dose (HNSTD, 150 mg/kg). At time points indicated, mice (n = 3/time point) were sacrificed and plasma and tissues (tumor, liver, and lung) were harvested. Concentrations of ganetespib in plasma and tissues were determined by isocratic reversed-phase high-performance liquid chromatography with electrospray ionization mass spectrometric (HPLC/MS-MS) detection.
Dissolved in DMSO and diluted 1:10 with 20% Cremophor RH 40; 25 mg/kg; Tail vein injection
Female severe combined immune-deficient (SCID) mice
References

[1]. Ganetespib (STA-9090), a Non-Geldanamycin HSP90 Inhibitor, has Potent Antitumor Activity in In Vitro and In Vivo Models of Non-Small Cell Lung Cancer. Clin Cancer Res. 2012 Jul 17.

[2]. Ganetespib, a unique triazolone-containing Hsp90 inhibitor, exhibits potent antitumor activity and a superior safety profile for cancer therapy. Mol Cancer Ther. 2012 Feb;11(2):475-84.

[3]. Phase I evaluation of STA-1474, a prodrug of the novel HSP90 inhibitor ganetespib, in dogs with spontaneous cancer. PLoS One. 2011;6(11):e27018.

[4]. Multifaceted intervention by the Hsp90 inhibitor ganetespib (STA-9090) in cancer cells with activated JAK/STAT signaling. PLoS One. 2011 Apr 14;6(4):e18552.

[5]. Identification of Therapeutic Targets in Rhabdomyosarcoma through Integrated Genomic, Epigenomic, and Proteomic Analyses. Cancer Cell. 2018 Sep 10;34(3):411-426.e19.

Additional Infomation
Ganetespib is a member of triazoles and a ring assembly.
Ganetespib is under investigation for the treatment of BREAST CANCER, Small Cell Lung Cancer, Acute Myeloid Leukaemia, and Myelodysplastic Syndrome.
Ganetespib is a synthetic small-molecule inhibitor of heat shock protein 90 (Hsp90) with potential antineoplastic activity. Ganetespib binds to and inhibits Hsp90, resulting in the proteasomal degradation of oncogenic client proteins, the inhibition of cell proliferation and the elevation of heat shock protein 72 (Hsp72); it may inhibit the activity of multiple kinases, such as c-Kit, EGFR, and Bcr-Abl, which as client proteins depend on functional HsP90 for maintenance. Hsp90, a 90 kDa molecular chaperone upregulated in a variety of tumor cells, plays a key role in the conformational maturation, stability and function of "client" proteins within the cell, many of which are involved in signal transduction, cell cycle regulation and apoptosis, including kinases, transcription factors and hormone receptors. Hsp72 exhibits anti-apoptotic functions; its up-regulation may be used as a surrogate marker for Hsp90 inhibition.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C20H20N4O3
Molecular Weight
364.4
Exact Mass
364.153
Elemental Analysis
C, 65.92; H, 5.53; N, 15.38; O, 13.17
CAS #
888216-25-9
Related CAS #
888216-25-9
PubChem CID
135564985
Appearance
White to yellow solid powder
Density
1.4±0.1 g/cm3
Boiling Point
685.8±57.0 °C at 760 mmHg
Flash Point
368.5±32.1 °C
Vapour Pressure
0.0±2.2 mmHg at 25°C
Index of Refraction
1.698
LogP
5.47
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
3
Heavy Atom Count
27
Complexity
610
Defined Atom Stereocenter Count
0
InChi Key
RVAQIUULWULRNW-UHFFFAOYSA-N
InChi Code
InChI=1S/C20H20N4O3/c1-11(2)14-9-15(18(26)10-17(14)25)19-21-22-20(27)24(19)13-4-5-16-12(8-13)6-7-23(16)3/h4-11,25-26H,1-3H3,(H,22,27)
Chemical Name
5-[2,4-dihydroxy-5-(1-methylethyl)phenyl]-4-(1-methyl-1H-indol-5-yl)-2,4-dihydro-3H- 1,2,4-triazol-3-one
Synonyms
STA-9090; Ganetespib; STA 9090; STA9090
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 40 mg/mL (109.8 mM)
Water:<1 mg/mL
Ethanol:<1 mg/mL
Solubility (In Vivo)
Solubility in Formulation 1: 10 mg/mL (27.44 mM) in 15% Cremophor EL + 85% Saline (add these co-solvents sequentially from left to right, and one by one), suspension solution; with sonication.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (6.86 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (6.86 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.


Solubility in Formulation 4: ≥ 2.5 mg/mL (6.86 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL corn oil and mix evenly.

Solubility in Formulation 5: 1% DMSO+30% polyethylene glycol+1% Tween 80: 30 mg/mL

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.7442 mL 13.7212 mL 27.4424 mL
5 mM 0.5488 mL 2.7442 mL 5.4885 mL
10 mM 0.2744 mL 1.3721 mL 2.7442 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT02008877 Completed Has Results Drug: Sirolimus/td> Malignant Peripheral Nerve
Sheath Tumors (MPNST)
Sarcoma Alliance for Research
through Collaboration
December 2013 Phase 1
Phase 2
NCT02192541 Terminated Has Results Drug: Ziv-Aflibercept
Drug: Ganetespib
Neoplasms National Cancer Institute (NCI) December 2, 2014 Phase 1
NCT01554969 Completed Drug: capecitabine + ganetespib Rectal Cancer Emory University May 2012 Phase 1
NCT01485835 Completed Drug: Ganetespib
Drug: Bortezomib
Multiple Myeloma Emory University January 2012 Phase 1
Biological Data
  • Ganetespib (STA-9090)

    Comparison of once-weekly and five times per week dosing of ganetespib.2012 Sep 15;18(18):4973-85.

  • Ganetespib (STA-9090)

    Ganetespib induces tumor regression in a mouse lung carcinoma model driven by ERRB2YVMA.2012 Sep 15;18(18):4973-85.

  • Ganetespib (STA-9090)

    Ganetespib accumulates in tumor relative to normal tissues and displays greaterin vivoefficacy than 17-AAG.2012 Sep 15;18(18):4973-85.

  • Ganetespib (STA-9090)

  • Ganetespib (STA-9090)

  • Ganetespib (STA-9090)

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