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KDU691

Alias: KDU 691; KDU-691; KDU691
Cat No.:V3212 Purity: ≥98%
KDU691 is a Plasmodium PI4 kinase (PI4K) inhibitor.
KDU691
KDU691 Chemical Structure CAS No.: 1513879-19-0
Product category: PI4K
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

KDU691 is a Plasmodium PI4 kinase (PI4K) inhibitor. It has been tested in vivo as a causal prophylactic and radical-cure agent for Plasmodium cynomolgi sporozoite-infected rhesus macaques, based on its in vitro activity against liver stages. KDU691 was administered orally after P. cynomolgi sporozoites were used to infect the animals. When used prophylactically, KDU691 was completely protective. On the other hand, when KDU691 was tested for radical cure, five daily doses of 20 mg/kg did not stop relapse because all animals developed a secondary infection as a result of the liver's hypnozoites being reactivated. These results suggest that Plasmodium PI4K may be a drug target for malaria prophylaxis but not for a radical treatment. It will take longer in vitro culture systems to evaluate KDU691's activity on mature hypnozoites and forecast radical cure in vivo.

Biological Activity I Assay Protocols (From Reference)
Targets
Plasmodium; PI4K
ln Vitro

In vitro activity: KDU691 is a Plasmodium PI4 kinase (PI4K) inhibitor. It has been tested in vivo as a causal prophylactic and radical-cure agent for Plasmodium cynomolgi sporozoite-infected rhesus macaques, based on its in vitro activity against liver stages. Animals were infected with P. cynomolgi sporozoites, and KDU691 was dosed orally. KDU691 was fully protective when administered prophylactically. In contrast, when tested for radical cure, five daily doses of 20 mg/kg of KDU691 did not prevent relapse, as all animals experienced a secondary infection due to the reactivation of hypnozoites in the liver. These findings indicate that Plasmodium PI4K is a potential drug target for malaria prophylaxis but not radical cure. Longer in vitro culture systems will be required to assess KDU691s activity on established hypnozoites and predict radical cure in vivo.


Kinase Assay: In vitro infections of primary rhesus hepatocytes with P. cynomolgi sporozoites were performed according to methods described previously by Zeeman et al. At day 6 postinfection (p.i.), the assay mixtures were fixed and stained with anti-P. cynomolgi Hsp70 rabbit antiserum and a fluorescein isothiocyanate (FITC)-labeled secondary antibody (goat anti-rabbit). Plates were analyzed with the Operetta high-content imaging system, differentially counting hypnozoites and developing extraerythrocytic forms (EEFs), based on parasite size.


Cell Assay: Sporozoites were harvested from P. cynomolgi-infected mosquitoes, washed with phosphate-buffered saline (PBS), and diluted to 100,000 sporozoites (spz)/ml in PBS. One-milliliter aliquots of sporozoites were prepared and injected into monkeys via intravenous (i.v.) injection.

ln Vivo
The animals that receive KDU691 as prophylactic treatment (group 691-proph) show no significant weight changes over the course of the 5 days of dosing. The animals given KDU691 treatment start to exhibit a fleeting yellow skin tone on the fourth day of dosing. At 31.8 days post-injection (range, 31–32 days), the KDU691 radical-cure group (group 691-RC) resumes blood-stage positivity. Bilirubin levels increase during the 5-day KDU691 radical-cure treatment, according to a clinical chemistry analysis of group 691-RC monkeys[2].
Enzyme Assay
In vitro infections of primary rhesus hepatocytes with P. cynomolgi sporozoites were performed according to methods described previously by Zeeman et al. At day 6 postinfection (p.i.), the assay mixtures were fixed and stained with anti-P. cynomolgi Hsp70 rabbit antiserum and a fluorescein isothiocyanate (FITC)-labeled secondary antibody (goat anti-rabbit). Plates were analyzed with the Operetta high-content imaging system, differentially counting hypnozoites and developing extraerythrocytic forms (EEFs), based on parasite size.
Cell Assay
Sporozoites were harvested from P. cynomolgi-infected mosquitoes, washed with phosphate-buffered saline (PBS), and diluted to 100,000 sporozoites (spz)/ml in PBS. One-milliliter aliquots of sporozoites were prepared and injected into monkeys via intravenous (i.v.) injection.
Animal Protocol
Female CD-1 mice (25 to 30g) are used for in vivo PK studies, and cage placement is random. Before the experiments begin, mice are given time to acclimate. Water and food are available at all times. In order to achieve doses of 25 mg/kg and 2.5 mg/kg, respectively, KDU691 is formulated at concentrations of 2.5 mg/mL and 0.25 mg/mL. Methyl cellulose and Tween 80 are each present in a concentration of 0.5% in the suspension formulation for p.o. dosing. Blood and liver samples are taken from mice after oral administration between 0.08 and 24 hours later. For each time point, three mice are grouped together. Plasma is extracted from the blood and stored at -20°C pending analysis after being centrifuged at 13,000 rpm for 7 minutes at 4°C.
References

[1]. The Plasmodium PI(4)K inhibitor KDU691 selectively inhibits dihydroartemisinin-pretreated Plasmodium falciparum ring-stage parasites. Sci Rep. 2017;7(1):2325. Published 2017 May 24.

[2]. PI4 Kinase Is a Prophylactic but Not Radical Curative Target in Plasmodium vivax-Type Malaria Parasites. Antimicrob Agents Chemother. 2016;60(5):2858-2863. Published 2016 Apr 22.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C₂₂H₁₈CLN₅O₂
Molecular Weight
419.86
Exact Mass
419.114
Elemental Analysis
C, 62.93; H, 4.32; Cl, 8.44; N, 16.68; O, 7.62
CAS #
1513879-19-0
Related CAS #
1513879-19-0
PubChem CID
90157166
Appearance
White to off-white solid powder
Density
1.4±0.1 g/cm3
Index of Refraction
1.676
LogP
1.47
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
4
Heavy Atom Count
30
Complexity
619
Defined Atom Stereocenter Count
0
SMILES
N12C=C(C(=O)N(C3C=CC(Cl)=CC=3)C)N=CC1=NC=C2C1C=CC(C(NC)=O)=CC=1
InChi Key
TYMFFISSODJRDV-UHFFFAOYSA-N
InChi Code
InChI=1S/C22H18ClN5O2/c1-24-21(29)15-5-3-14(4-6-15)19-11-26-20-12-25-18(13-28(19)20)22(30)27(2)17-9-7-16(23)8-10-17/h3-13H,1-2H3,(H,24,29)
Chemical Name
N-(4-chlorophenyl)-N-methyl-3-[4-(methylcarbamoyl)phenyl]imidazo[1,2-a]pyrazine-6-carboxamide
Synonyms
KDU 691; KDU-691; KDU691
HS Tariff Code
2934.99.03.00
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 84~150 mg/mL (200.1~357.3 mM)
Ethanol: ~10 mg/mL (~23.8 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (5.95 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (5.95 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (5.95 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.3817 mL 11.9087 mL 23.8175 mL
5 mM 0.4763 mL 2.3817 mL 4.7635 mL
10 mM 0.2382 mL 1.1909 mL 2.3817 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
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