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LRRK2-IN-1

Alias: LRRK2-IN 1; LRRK2-IN1; LRRK2-IN-1;
Cat No.:V0776 Purity: ≥98%
LRRK2-IN-1 (LRRK2-IN 1; LRRK2 IN-1) is a novel, highly potent and selective inhibitor of leucine-rich repeat kinase 2 (LRRK2) with anti-PD (Parkinsons disease) activity.
LRRK2-IN-1
LRRK2-IN-1 Chemical Structure CAS No.: 1234480-84-2
Product category: LRRK2
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

LRRK2-IN-1 (LRRK2-IN 1; LRRK2 IN-1) is a novel, highly potent and selective inhibitor of leucine-rich repeat kinase 2 (LRRK2) with anti-PD (Parkinson's disease) activity. It inhibits LRRK2 (G2019S) and LRRK2 (WT) with IC50s of 6 nM and 13 nM, respectively. Mutations in LRRK2 are closely related to late-onset autosomal dominant Parkinson's disease.

Biological Activity I Assay Protocols (From Reference)
ln Vitro
The TR-FRET signal is 2.5 times higher in the wild-type and G2019S transduction, and this signal can be dose-dependently inhibited by LRRK2-IN-1, with IC50 values of 0.08 µM and 0.03 µM, respectively[1]. In DCLK2 inhibition, LRRK2-IN-1 had an IC50 of 45 nM. In biochemical assays for AURKB, CHEK2, MKNK2, MYLK, NUAK1, and PLK1, it has an IC50 of more than 1 µM. It has been verified that LRRK2-IN-1 inhibits MAPK7, with an EC50 of 160 nM. When LRRK2-IN-1 is stably transfected into HEK293 cells, it causes a dose-dependent inhibition of Ser910 and Ser935 phosphorylation along with the loss of 14-3-3 binding. IC50 of 49.3 µM indicates that LRRK2-IN-1 is moderately cytotoxic to HepG2 cells. In both the presence and absence of S9, LRRK2-IN-1 exhibits genotoxicity at 15.6 and 3.9 µM, respectively[3]. LRRK2-IN-1 prevents HCT116 and AsPC-1 cells from proliferating, migrating, and causing cell death with characteristics of apoptosis[4].
ln Vivo
LRRK2-IN-1 (100 mg/kg, ip) causes LRRK2 to be dephosphorylated in the mice's kidney[2]. AsPC-1 tumor xenografts' tumor volume and weight significantly decrease after intraperitoneal injection of LRRK2-IN-1 (100 mg/kg)[4].
Animal Protocol
Dissolved in captisol; 100 mg/kg; i.p. injection
Wild type male C57BL/6 mice
References

[1]. Screening for Novel LRRK2 Inhibitors Using a High-Throughput TR-FRET Cellular Assay for LRRK2 Ser935 Phosphorylation.PLoS One. 2012;7(8):e43580. Epub 2012 Aug 28.

[2]. Characterization of a selective inhibitor of the Parkinson's disease kinase LRRK2. Nature Chemical Biology (2011), 7(4), 203-205.

[3]. Alternative to LRRK2-IN-1 for Pharmacological Studies of Parkinson's Disease. Pharmacology. 2015;96(5-6):240-7.

[4]. Small molecule kinase inhibitor LRRK2-IN-1 demonstrates potent activity against colorectal and pancreatic cancer through inhibition of doublecortin-like kinase 1. Mol Cancer. 2014 May 6;13:103.

Additional Infomation
LRRK2-IN-1 is a member of the class of pyrimidobenzodiazepines that is 5,11-dimethylpyrimido[4,5-b][1,4]benzodiazepin-6-one carrying at C-2 on the pyrimidine ring a 4-[(4-methylpiperazin-1-yl)piperidine-1-carbonyl]-2-methoxyanilino substituent. It is an inhibitor of the Parkinson's disease kinase LRRK2. It has a role as an EC 2.7.11.1 (non-specific serine/threonine protein kinase) inhibitor and an antineoplastic agent. It is a N-acylpiperidine, a N-alkylpiperazine, an aromatic ether, a pyrimidobenzodiazepine, an aromatic amine, a secondary amino compound and a tertiary amino compound.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C31H38N8O3
Molecular Weight
570.69
Exact Mass
570.306
CAS #
1234480-84-2
Related CAS #
1234480-84-2
PubChem CID
46843906
Appearance
Light yellow to yellow solid powder
Density
1.3±0.1 g/cm3
Boiling Point
787.8±70.0 °C at 760 mmHg
Flash Point
430.3±35.7 °C
Vapour Pressure
0.0±2.7 mmHg at 25°C
Index of Refraction
1.641
LogP
0.36
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
9
Rotatable Bond Count
5
Heavy Atom Count
42
Complexity
939
Defined Atom Stereocenter Count
0
InChi Key
IWMCPJZTADUIFX-UHFFFAOYSA-N
InChi Code
InChI=1S/C31H38N8O3/c1-35-15-17-38(18-16-35)22-11-13-39(14-12-22)29(40)21-9-10-24(27(19-21)42-4)33-31-32-20-26-28(34-31)36(2)25-8-6-5-7-23(25)30(41)37(26)3/h5-10,19-20,22H,11-18H2,1-4H3,(H,32,33,34)
Chemical Name
2-((2-methoxy-4-(4-(4-methylpiperazin-1-yl)piperidine-1-carbonyl)phenyl)amino)-5,11-dimethyl-5,11-dihydro-6H-benzo[e]pyrimido[5,4-b][1,4]diazepin-6-one
Synonyms
LRRK2-IN 1; LRRK2-IN1; LRRK2-IN-1;
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 100 mg/mL (175.2 mM)
Water:<1 mg/mL
Ethanol:100 mg/mL (175.2 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (4.38 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (4.38 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (4.38 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


Solubility in Formulation 4: Captisol: 17mg/mL

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.7523 mL 8.7613 mL 17.5226 mL
5 mM 0.3505 mL 1.7523 mL 3.5045 mL
10 mM 0.1752 mL 0.8761 mL 1.7523 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
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Biological Data
  • LRRK2-IN-1

    Enzymatic activity of LRRK2-IN-1 and its selectivity.Nat Chem Biol.2011 Apr;7(4):203-5.



    LRRK2-IN-1
    LRRK2-IN-1 alters the cytoplasmic localisation of LRRK2.Nat Chem Biol.2011 Apr;7(4):203-5.
  • LRRK2-IN-1

    LRRK2-IN-1 inhibits LRRK2 in vivo.Nat Chem Biol.2011 Apr;7(4):203-5.
  • LRRK2-IN-1

    Kinase inhibitory effects of LRRK2-IN1, TTT-3002 and H-1152 on recombinant LRRK2 and mutants in vitro.Hum Mol Genet.2013 Jan 15;22(2):328-44.



    LRRK2-IN-1

    Transgenic worms expressing R1441C/A2016T- and G2019S/A2016T-LRRK2 exhibit dopaminergic behavioral deficit and neurodegeneration but are resistant to treatment with LRRK2 inhibitors.Hum Mol Genet.2013 Jan 15;22(2):328-44.
  • LRRK2-IN-1

    Effect of LRRK2-IN1 and TTT-3002 on S935 phosphorylation of LRRK2 in human cell lines.Hum Mol Genet.2013 Jan 15;22(2):328-44.
  • LRRK2-IN-1

    Treatment with TTT-3002 and LRRK2-IN1 during different life stages prevents or rescues behavioral deficit in transgenic R1441C and G2019S worms.Hum Mol Genet.2013 Jan 15;22(2):328-44.
  • LRRK2-IN-1

    Treatment with TTT-3002 and LRRK2-IN-1 arrests neurodegeneration in transgenic R1441C and G2019S worms.Hum Mol Genet.2013 Jan 15;22(2):328-44.
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