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Pelitrexol

Cat No.:V12655 Purity: ≥98%
Pelitrexol (AG 2037) is an inhibitor (blocker/antagonist) of glycylamide ribonucleotide formyltransferase (GARFT).
Pelitrexol
Pelitrexol Chemical Structure CAS No.: 446022-33-9
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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1mg
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10mg
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Product Description
Pelitrexol (AG 2037) is an inhibitor (blocker/antagonist) of glycylamide ribonucleotide formyltransferase (GARFT). Pelitrexol also inhibits mTORC1 by reducing the levels of GTP-bound Rheb, an obligate activator of mTORC1. Pelitrexol has potent tumor growth inhibition in mouse models.
Biological Activity I Assay Protocols (From Reference)
ln Vitro
Pelitrexo (150 nM; 24 h) significantly suppresses mTORC1 activity in A549 cells by lowering intracellular guanine nucleotide and GTP-bound Rheb protein levels [1]. In NCI-H460 cells, pelitrexo (0-1000 mM; 16 h) dose-dependently and potently suppresses the phosphorylation levels of ribosomal protein S6 (S6RP), S6K1, and Chk1 [1]. In NCI-H460 cells, pelitrexo (100 nM; 48 h) stops the cell cycle in the G1 phase [1].
ln Vivo
Pelitrexo (10 mg/kg, 20 mg/kg; i.p.; every 4 days for 3 weeks) inhibits the growth of tumors and mTORC1 in mice with xenografts of non-small cell lung cancer (NSCLC) [1]. Pelitrexo (20 mg/kg; i.p.; every 4 days for 3 weeks) suppresses the function of mTORC1 and inhibits purine biosynthesis that is dependent on GARFT [1].
Cell Assay
Cell cycle analysis[1]
Cell Types: NCI-H460 NSCLC
Tested Concentrations: 100 nM
Incubation Duration: 4, 8, 24, 48 hrs (hours)
Experimental Results: 63% of cells accumulated in the G1 phase of the cell cycle.

Cell cycle analysis[1]
Cell Types: NCI-H460 NSCLC
Tested Concentrations: 0, 10, 30, 100, 300, 1000 nM
Incubation Duration: 16 hrs (hours)
Experimental Results: Inhibition of p-S6RP, p-S6K1 and p-Chk1 levels.
Animal Protocol
Animal/Disease Models: Mouse non-small cell lung cancer (NSCLC) xenograft model [1]
Doses: 10 mg/kg, 20 mg/kg
Route of Administration: intraperitoneal (ip) injection; Group 1 once every 4 days for 3 weeks; Group 2 The results of administration on days 1, 4, and 7 of each group: In group 1, 10 mg/kg and 20 mg/kg inhibited tumor growth by 64% and 69%, respectively. Inhibits mTORC1-dependent phosphorylation of S6K1, S6RP and CAD Group 2 20 mg/kg.
References

[1]. Purine Nucleotide Availability Regulates mTORC1 Activity through the Rheb GTPase. Cell Rep. 2017 Jun 27;19(13):2665-2680.

Additional Infomation
Pelitrexol has been used in trials studying the treatment of Unspecified Adult Solid Tumor, Protocol Specific.
Pelitrexol is a water soluble antifolate with anti-proliferative activity. Pelitrexol inhibits activity of glycinamide ribonucleotide formyltransferase (GARFT), the first folate-dependent enzyme of the de novo purine synthesis pathway essential for cell proliferation. Enzyme inhibition reduces the purine nucleotides pool required for DNA replication and RNA transcription. As a result, this agent causes cell cycle arrest in S-phase, and ultimately inhibits tumor cell proliferation
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C20H25N5O6S
Molecular Weight
463.5074
Exact Mass
463.152
CAS #
446022-33-9
PubChem CID
135431074
Appearance
Off-white to light yellow solid powder
Density
1.6±0.1 g/cm3
Index of Refraction
1.743
LogP
-0.58
Hydrogen Bond Donor Count
6
Hydrogen Bond Acceptor Count
9
Rotatable Bond Count
9
Heavy Atom Count
32
Complexity
859
Defined Atom Stereocenter Count
2
SMILES
CC1=C(SC(=C1)C(=O)N[C@@H](CCC(=O)O)C(=O)O)CC[C@H]2CC3=C(NC2)N=C(NC3=O)N
InChi Key
QXOPTIPQEVJERB-JQWIXIFHSA-N
InChi Code
InChI=1S/C20H25N5O6S/c1-9-6-14(18(29)23-12(19(30)31)3-5-15(26)27)32-13(9)4-2-10-7-11-16(22-8-10)24-20(21)25-17(11)28/h6,10,12H,2-5,7-8H2,1H3,(H,23,29)(H,26,27)(H,30,31)(H4,21,22,24,25,28)/t10-,12-/m0/s1
Chemical Name
(2S)-2-[[5-[2-[(6S)-2-amino-4-oxo-5,6,7,8-tetrahydro-3H-pyrido[2,3-d]pyrimidin-6-yl]ethyl]-4-methylthiophene-2-carbonyl]amino]pentanedioic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~25 mg/mL (~53.94 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (4.49 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (4.49 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.08 mg/mL (4.49 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.1575 mL 10.7873 mL 21.5745 mL
5 mM 0.4315 mL 2.1575 mL 4.3149 mL
10 mM 0.2157 mL 1.0787 mL 2.1575 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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