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PF-3450074

Alias: PF74; PF-74; PF 74; PF-3450074; PF 3450074; PF3450074;
Cat No.:V3323 Purity: ≥98%
PF-3450074 (also known as PF74) is a HIV-1 capsid-targeting small molecule antiviral compound which directly binds to the capsid (CA) protein at a site also utilized by host cell proteins CPSF6 and NUP153.
PF-3450074
PF-3450074 Chemical Structure CAS No.: 1352879-65-2
Product category: HIV
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

PF-3450074 (also known as PF74) is a HIV-1 capsid-targeting small molecule antiviral compound which directly binds to the capsid (CA) protein at a site also utilized by host cell proteins CPSF6 and NUP153. The RNA genome of human immunodeficiency virus type 1 (HIV-1) is enclosed in a cone-shaped capsid shell that disassembles following cell entry via a process known as uncoating. During HIV-1 infection, the capsid is important for reverse transcription and entry of the virus into the target cell nucleus. The small molecule PF74 inhibits HIV-1 infection at early stages by binding to the capsid and perturbing uncoating.

Biological Activity I Assay Protocols (From Reference)
Targets
NL4.3 strain(IC50=0.72 μM)
ln Vitro
PF-3450074, also known as PF-74, demonstrates antiviral properties against the HIV T107N mutant and HIV wild type NL4-3, with EC50 values of 4.5μM and 0.72μM, respectively[1].
In primary human peripheral blood mononuclear cells (PBMCs), PF-3450074 (PF-74) exhibits good potency, inhibiting HIV-193RW025, HIV-1JR-CSF, and HIV-193MW965 with IC50 values of 1.5 ± 0.9 μM, 0.6 ± 0.20 μM, and 0.6 ± 0.10 μM, respectively. The median IC50 and CC50 values for this compound are 0.9 ± 0.5 μM and 90.5 ± 5.9 μM, respectively[1].
Derived similarly to NUP153, the KD for the interaction between PF-74 and the CA hexamer is found to be 176 ± 78 nM[1].
PF-3450074 (PF-74) (10 μM; 8 hours) significantly lowers the late products of reverse transcription in stocks of DNase I-treated Env-defective HIV-1 (R9.Env-) in HeLa-P4 cells[2].
Cell Assay
Cell Line: HeLa-P4 cells
Concentration: 10 μM
Incubation Time: 8 hours
Result: prevented target cells from undergoing HIV-1 reverse transcription.
References

[1]. J Drug Des Res. 2018;5(2). pii: 1070. Epub 2018 Aug 13.

[2]. J Virol. 2011 Jan;85(1):542-9.

[3]. J Virol.2016 May 27;90(12):5808-5823.

[4]. J Virol.2018 Sep 26;92(20). pii: e00845-18.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C27H27N3O2
Molecular Weight
425.53
Exact Mass
425.21
Elemental Analysis
C, 76.21; H, 6.40; N, 9.87; O, 7.52
CAS #
1352879-65-2
Related CAS #
1352879-65-2;
Appearance
Solid powder
SMILES
O=C(N[C@@H](CC1=CC=CC=C1)C(N(C)C2=CC=CC=C2)=O)CC3=C(C)NC4=C3C=CC=C4
InChi Key
ACDFWSNAQWFRRF-VWLOTQADSA-N
InChi Code
InChI=1S/C27H27N3O2/c1-19-23(22-15-9-10-16-24(22)28-19)18-26(31)29-25(17-20-11-5-3-6-12-20)27(32)30(2)21-13-7-4-8-14-21/h3-16,25,28H,17-18H2,1-2H3,(H,29,31)/t25-/m0/s1
Chemical Name
2-Methyl-N-[(1S)-2-(methylphenylamino)-2-oxo-1-(phenylmethyl)ethyl]- 1H-indole-3-acetamide
Synonyms
PF74; PF-74; PF 74; PF-3450074; PF 3450074; PF3450074;
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~250 mg/mL (~587.52 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 6.25 mg/mL (14.69 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 62.5 mg/mL clear DMSO stock solution to 900 μL corn oil and mix evenly.

Solubility in Formulation 2: 10% DMSO+90% Corn Oil: ≥ 6.25 mg/mL (14.69 mM)

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.3500 mL 11.7501 mL 23.5001 mL
5 mM 0.4700 mL 2.3500 mL 4.7000 mL
10 mM 0.2350 mL 1.1750 mL 2.3500 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • PF-74 bound in the inter-protomer pocket.[1].J Drug Des Res. 2018;5(2). pii: 1070. Epub 2018 Aug 13.
  • (A) The individual models that comprise the modified oral non-CNS (central nervous system) drug profile and their respective importance to the profile. [1].J Drug Des Res. 2018;5(2). pii: 1070. Epub 2018 Aug 13.
  • Sensorgrams depicting the interaction of (A) NUP1531407– 1423 peptide, (B) PF-74, (C) CX03, (D) CX04, (E) CX05, and (F) CX06, with immobilized HIV-1NL4–3 CA hexamer. [1].J Drug Des Res. 2018;5(2). pii: 1070. Epub 2018 Aug 13.
  • CX06 functions in the late and early stages of HIV-1 replication.[1].J Drug Des Res. 2018;5(2). pii: 1070. Epub 2018 Aug 13.
  • CX06 treatment drastically reduces late reverse transcriptase products, 2-LTR circles, and integrated provirus.[1].J Drug Des Res. 2018;5(2). pii: 1070. Epub 2018 Aug 13.
  • Molecular modeling of PF-74 and CX06 with wild-type and CA Q63A mutant CA protein. [1].J Drug Des Res. 2018;5(2). pii: 1070. Epub 2018 Aug 13.
  • Overlay of the dockedCX06 (pink) on the co-crystalized PF-74 (white).[1].J Drug Des Res. 2018;5(2). pii: 1070. Epub 2018 Aug 13.
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