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RGB-286638 free base

Alias: RGB-286638 free base; RGB-286638; RGB 286638; RGB286638
Cat No.:V2853 Purity: ≥98%
RGB-286638 is a multi-targeted cyclin-dependent kinase (CDK) inhibitor.
RGB-286638 free base
RGB-286638 free base Chemical Structure CAS No.: 784210-88-4
Product category: CDK
This product is for research use only, not for human use. We do not sell to patients.
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Other Forms of RGB-286638 free base:

  • RGB-286638 2HCl
Official Supplier of:
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Top Publications Citing lnvivochem Products
Purity & Quality Control Documentation

Purity: ≥98%

Product Description

RGB-286638 is a multi-targeted cyclin-dependent kinase (CDK) inhibitor. It has IC50 values of 1, 2, 3, 4, 5, and 5 nM for cyclin T1-CDK9, B1-CDK1, E-CDK2, D1-CDK4, E-CDK3, and p35-CDK5 kinase activity inhibition; IC50 values of 3, 5, 50, and 54 nM for GSK-3β, TAK1, Jak2, and MEK1 kinase activity inhibition are also observed. RGB-286638 inhibits transcriptional CDKs, which in turn initiates P53-dependent and -independent anti-multiple myeloma (MM) activity. When MM tumor growth was inhibited and in vivo survival was extended, GB-286638 treatment led to MM cytotoxicity in vitro. Both wt-p53 and mutant-p53 cells showed caspase-dependent apoptosis, which was closely linked to transcription inhibition and RNA polymerase II phosphorylation downregulation.

Biological Activity I Assay Protocols (From Reference)
Targets
T1-CDK9 (IC50 = 1 nM); cyclin B1-CDK1 (IC50 = 2 nM); cyclin E-CDK2 (IC50 = 3 nM); cyclin D1-CDK4 (IC50 = 4 nM); cyclin E-CDK3 (IC50 = 5 nM); p35-CDK5 (IC50 = 5 nM); cyclin H-CDK7 (IC50 = 44 nM); cyclin D3-CDK6 (IC50 = 55 nM); GSK-3β (IC50 = 3 nM); JAK2 (IC50 = 50 nM); MEK1 (IC50 = 54 nM); Fms (IC50 = 1 nM); TAK1 (IC50 = 5 nM); JNK1a1 (IC50 = 17 nM); JNK1a2 (IC50 = 40 nM); C-src (IC50 = 25 nM); AMPK (IC50 = 41 nM)
ln Vitro
RGB-286638 is a CDK inhibitor (CDKI) derived from indenopyrazole that exhibits Ki-nanomolar activity against transcriptional CDKs. AMPK, Jak2, MEK1, TAK1, GSK-3β, and other tyrosine and serine/threonine non-CDK enzymes are all inhibited by RGB-286638. By using the MTT assay to measure viability at 24 and 48 hours, the effects of RGB-286638 (12.5-100nM) treatment are examined on the growth of human p53-wt (MM.1S, MM.1R, and H929) and p53-mutant (U266, OPM1, and RPMI) MM cells. After 48 hours, the half-maximally effective concentrations (EC50) vary from 20 to 70 nM. Following 50nM treatment, dose-dependent growth differences between p53-wt and -mutant cells are seen, with p53-wt MM.1S, MM.1R, and H929 showing a slight increase in sensitivity to RGB-286638 treatment at 48 hours[1].
ln Vivo
The highest tolerated dosage in SCID mice, according to dose-finding studies using RGB-286638, is 40 mg/kg/day IV therapy. RGB-286638 treatment for five days intravenously significantly suppresses the growth of MM tumors; the maximum TGI (%) in the 30 mg/kg and 40 mg/kg treated cohorts is recorded at day 14 after treatment completion, at 85.06% and 86.34%, respectively. Each of the two treated groups has a log10 cell kill (LCK Td: 4.5 days) of 1.6. The first death in the control group occurred on day 24, while in the treated groups it occurred on day 43. This suggests that treatment with RGB-286638 is also linked to improved survival. This study did not result in any toxic deaths. The highest percentage of body weight (BW) loss was noted on day 5 (8.4%) at a dosage schedule of 30 mg/kg and on day 15 (9.9%) after a dosage of 40 mg/kg. The following two weeks saw weight recovery[1].
Enzyme Assay
The Nuclear Extraction Kit is used to isolate nuclear proteins from MM.1S cells that have been exposed to 50nM RGB-286638 for 1, 4, and 8 hours. A specific double-stranded DNA sequence containing the p53 response element is coated on 96-well plates, and nuclear protein aliquots are added for an overnight incubation. By adding a particular primary antibody that targets p53, p53 in the nuclear extract can be identified. A sensitive colorimetric readout at 450 nm is achieved by adding a secondary antibody conjugated to HRP. Triple-checking is done on every experiment[1].
Cell Assay
Colorimetric assays are used to measure the efficacy of drugs at progressively higher RGB-286638 concentrations (0-100nM). 100 μL of isopropanol containing 0.04 HCl is added to each well after 10μL of 5 mg/mL MTT is pulsed into each well of p53-expressing wild-type (MM.1S, MM.1R, H929) or mutant (U266, OPM1, RPMI) cells from 24- or 48-hour cultures. The cells are then incubated at 37°C for 4 hours. Using a spectrophotometer, absorbance measurements are made at 570 nm wavelength (corrected using readings at 630 nm). Three duplicates of each experiment are run[1].
Animal Protocol
40 mg/kg; i.v.
Mice: RGB-286638's in vivo anti-MM activity is assessed using an MM xenograft model. Agennix AG prepares and supplies the RGB-286638 dosing solutions, which come in 2 and 3 mg/mL in 5% dextrose/water (D5W) pH5.2 as well as D5W pH5.2 for the vehicle control dosing group. The mice used are CB-17 severe combined immunodeficient (SCID). A total of forty male mice aged five to six weeks are exposed to 2 Gy [200 rad] of radiation using a cesium 137 (137Cs)-irradiator source; 24 hours post-irradiation, the mice measure 2.5 x 106 MM. Subcutaneous inoculation of the upper back is done with 1S cells. Mice are randomized into three cohorts when the tumor weight is roughly 100 mg, and they are given daily IV tail vein injections for five days straight with either RGB-286638 30 mg/kg (8 mice), 40 mg/kg (9 mice), or control vehicle alone (10 mice). Every other day, the body weight and tumor volume of the animals are measured using calipers. Volume of tumor is estimated. From the first day of treatment until death, survival is assessed. From the first day of treatment until the first sacrifice day, measurements taken with a caliper are used to assess the growth of the tumor. Tumor growth inhibition (TGI) percentage is computed.
References

[1]. Small-molecule multi-targeted kinase inhibitor RGB-286638 triggers P53-dependent and -independent anti-multiple myeloma activity through inhibition of transcriptional CDKs. Leukemia. 2013 Dec;27(12):2366-75.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C29H35N7O4
Molecular Weight
545.28
Exact Mass
545.28
Elemental Analysis
C, 63.84; H, 6.47; N, 17.97; O, 11.73
CAS #
784210-88-4
Related CAS #
RGB-286638;784210-87-3
Appearance
Solid powder
SMILES
COCCN1CCN(CC1)CC2=CC=C(C=C2)C3=NNC4=C3C(=O)C5=C4C=CC=C5NC(=O)NN6CCOCC6
InChi Key
XLSYZSRXVVCHLS-UHFFFAOYSA-N
InChi Code
InChI=1S/C29H35N7O4/c1-39-16-13-34-9-11-35(12-10-34)19-20-5-7-21(8-6-20)26-25-27(32-31-26)22-3-2-4-23(24(22)28(25)37)30-29(38)33-36-14-17-40-18-15-36/h2-8H,9-19H2,1H3,(H,31,32)(H2,30,33,38)
Chemical Name
1-[3-[4-[[4-(2-methoxyethyl)piperazin-1-yl]methyl]phenyl]-4-oxo-1H-indeno[1,2-c]pyrazol-5-yl]-3-morpholin-4-ylurea
Synonyms
RGB-286638 free base; RGB-286638; RGB 286638; RGB286638
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ≥ 36 mg/mL
Water: <1 mg/mL
Ethanol:
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.8339 mL 9.1696 mL 18.3392 mL
5 mM 0.3668 mL 1.8339 mL 3.6678 mL
10 mM 0.1834 mL 0.9170 mL 1.8339 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • RGB-286638 free base

    RGB-286638-Induced Cytotoxicity in Vitro Translates in Anti-MM Activity in Vivo.2013 Dec;27(12):2366-75
  • RGB-286638 free base

    RGB-286638 Triggered Stabilization and Activation of p53.2013 Dec;27(12):2366-75

  • RGB-286638 free base

    RGB-286638 Mediated p53-Independent Apoptosis in MM Cells.2013 Dec;27(12):2366-75
  • RGB-286638 free base


    RGB-286638 Demonstrated Potent Activity Against Transcriptional CDKs in MM Cell Lines and Inhibited Myeloma Cell Growthin Vitro.2013 Dec;27(12):2366-75.

  • RGB-286638 free base


    RGB-286638 Inhibited Transcription.2013 Dec;27(12):2366-75.

  • RGB-286638 free base


    RGB-286638 Effects on miRNA Expression.2013 Dec;27(12):2366-75.

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