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SB-3CT

Alias: SB3CT; SB3-CT; 2-[(4-phenoxyphenyl)sulfonylmethyl]thiirane; 2-((4-phenoxyphenylsulfonyl)methyl)thiirane; 2-(((4-Phenoxyphenyl)sulfonyl)methyl)thiirane; (4-phenoxyphenylsulfonyl)methylthiirane; CHEMBL483857; Thiirane, 2-[[(4-phenoxyphenyl)sulfonyl]methyl]-; SB-3CT
Cat No.:V0740 Purity: ≥98%
SB-3CT (SB 3CT) is a non-selective and covalent inhibitor of gelatinases/matrix metalloproteinase (MMP) with potential antineoplastic activity.
SB-3CT
SB-3CT Chemical Structure CAS No.: 292605-14-2
Product category: MMP
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

SB-3CT (SB 3CT) is a non-selective and covalent inhibitor of gelatinases and matrix metalloproteinase (MMP) that may have anti-tumor effects. With a Ki of 13.9 nM and 600 nM, respectively, it inhibits the activity of gelatinases A (MMP-2) and B (MMP-9). Gelatinases A and B, which hydrolyze extracellular matrix, have a role in angiogenesis and tumor metastasis.

Biological Activity I Assay Protocols (From Reference)
Targets
MMP-2 (Ki = 13.9 nM); MMP-9 (Ki = 600 nM)
ln Vitro
(R)-MG-132, the stereoisomer of MG-132, is being investigated as a possible inhibitor of the proteasome's ability to hydrolyze peptidylglutamyl peptide, trypsin, and chymotrypsin-like activities[1]. The effects of MG-132 and (R)-MG-132 on the inhibition of trypsin-like (TL), peptidylglutamyl peptide hydrolyzing (PGPH), and ChTL of purified 20S proteasomes isolated from human erythrocytes are being studied. MG-132 has IC₅₀ values of 0.89 μM, 104.43 μM, and 5.7 μM for ChTL, TL, and PGPH, in that order. The IC₅₀ values for ChTL, TL, and PGPH of (R)-MG-132 are 0.22 μM, 34.4 μM, and 2.95 μM, respectively[1].
ln Vivo
SB-3CT (i.p.; 50 mg/kg; every other day; five weeks) prevents the intraosseous growth of human PC3 cells in the marrow of human fetal femur fragments that have been implanted in SCID mice[3].
Enzyme Assay
The fluorescence quenched substrate MOCAcPLGLA2pr(Dnp)-AR-NH2 is used to measure the enzymatic activity of MMP-2, MMP-9, and MMP-7. Using a PTI spectrofluorometer, fluorescence is measured. The temperature of the cuvette compartment is set to 25 °C.
Cell Assay
Cell proliferation assay[3]
PC3 cells were seeded in 35-mm dishes (5 × 104 cells/dish) in complete culture medium. The next day, the medium was replaced with complete medium supplemented with 1% DMSO alone (vehicle) or SB-3CT (final concentrations 0.1–50 μM) in 1% DMSO. At various times, the cells were harvested with trypsin and counted.
Effect of SB-3CT on BMEC-1 cell viability[3]
BMEC-1 cells were seeded in 96-well culture plates (104 cells/well) in complete culture medium. Twenty-four h later, the medium was replaced with serum-free, phenolred-free media supplemented with either vehicle (1% DMSO) or SB-3CT (1 nM–50 μM final concentrations). After 72 h, 10 μL of WST-1 were added to each well, and the optical density was measured at 450 nm, according to the manufacturer's instructions.
Capillary-like tubule formation assay[3]
Twenty-four-well plates were coated with 300 μL of an ice-cold Matrigel solution (10 mg/mL). The plates were then incubated for 30 min at 37°C to allow Matrigel polymerization, and then 5 × 104 BMEC-1 cells were placed onto the Matrigel-coated wells in the presence of complete medium supplemented with various amounts of SB-3CT (0.1–1 μM) or vehicle (1% DMSO). After overnight incubation at 37°C, digital photographs of three randomly selected areas from each well were taken at 10× magnification, using an Olympus® DP12 Microscope Camera. The area occupied by the capillary-like structures was calculated using Adobe Photoshop 7.0.
Endothelial cell invasion assay[3]
BMEC-1 cells suspended in Medium-199 with 0.1 % bovine serum albumin supplemented with either SB-3CT (0.1–1 μM) or 1% DMSO (vehicle) were seeded (2 × 105 cells per insert) onto Transwell inserts (8-μm pore size) coated with 25 μg/filter Matrigel. Culture medium supplemented with 5% FBS was placed in the lower chamber as a chemoattractant. After 24 h incubation at 37°C, the cells that migrated to the lower side of the filter were stained with Diff-Quik® and counted under 200× magnification.
Animal Protocol
Five-week-old male C.B.-17.SCID mice[3]
50 mg/kg
IP; every other day; five weeks
In situ gelatin zymography[3]
Frozen tissue sections were obtained from HT1080 tumors grown subcutaneously in SCID mice, which were intraperitonially (i.p.) treated for two consecutive days before sacrifice either with 1 mL vehicle (10% DMSO in PBS) or 1 ml containing 1.25 mg SB-3CT in 10% DMSO (equivalent to 50 mg/kg of mouse weight). In situ gelatin zymography was performed in 8-μm thick unfixed cryostat tumor sections incubated for 1 h with 100 μg/ml DQ™-gelatin and 1 μg/mL DAPI (Molecular Probes), as described previously. Establishment of PC3 human bone tumors and experimental treatment[3]
One fourth human fetal femur fragments were implanted subcutaneously in SCID mice as described previously.29 Four weeks later, 1 × 105 PC3 cells were injected through the mouse skin directly into the marrow of the previously implanted bone, as described.29 Twenty-four h after tumor cell inoculation, the mice were injected i.p. with either vehicle (10% DMSO) or SB-3CT in 10% DMSO (50 mg/kg of mouse weight) every other day. Each experimental group contained 9 animals.
Five weeks after tumor cell inoculation, the mice were killed and bone implants harvested, weighed, fixed overnight in 10% buffered formalin, and then X-ray imaged using a Lo-Rad M-IV mammography unit with a magnified specimen technique. Images were developed using a Kodak 2000 screen and radiography film. For histomorphometrical and histological analyses, bone tumors were decalcified with 10% ethylenediaminetetraacetic acid (EDTA) (pH 6.5) in PBS, dehydrated, infiltrated and paraffin-embedded.
SB-3CT, a discovery from the Mobashery laboratory, was synthesized for this study by reported methodology. Mice were divided into four groups: vehicle-treated group and SB-3CT-treated one with treatment for either one day or seven days after embolic MCA occlusion. SB-3CT (12.5 mg/mL) was freshly dissolved in 25% DMSO/65% PEG-200/10% water and filtered through an Acrodisc syringe filter with a 0.2 μm, 13-mm diameter sterile hydrophobic PTFE membrane. Mice were ip injected with 2 μL/gram body weight of this solution (equivalent to 25 mg/kg) 2 hours after embolic ischemia, followed by an additional dose at 4 hours. In repeated-dose treatment conditions, the same dose of SB-3CT was ip administered 2 and 4 hours after embolic ischemia, followed by once daily from post-ischemia day 1 to 6. Earlier work indicated that ip administration of SB-3CT does not alter mean arterial blood pressure, pH, PCO2, and PO2[4].
References

[1]. Water-Soluble MMP-9 Inhibitor Reduces Lesion Volume after Severe Traumatic Brain Injury. ACS Chem Neurosci. 2015 Oct 21;6(10):1658-64.

[2]. Potent and Selective Mechanism-Based Inhibition of GelatinasesJ. Am. Chem. Soc.2000122286799-6800

[3]. Inhibition of human prostate cancer growth, osteolysis and angiogenesis in a bone metastasis model by a novel mechanism-based selective gelatinase inhibitor. Int J Cancer. 2006, 118(11), 2721-2726.

[4]. Inhibition of MMP-9 by a selective gelatinase inhibitor protects neurovasculature from embolic focal cerebral ischemia. Mol Neurodegener. 2012, 15, 7-21.

Additional Infomation
2-[(4-phenoxyphenyl)sulfonylmethyl]thiirane is an aromatic ether.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C15H14O3S2
Molecular Weight
306.40
Exact Mass
306.038
Elemental Analysis
C, 58.80; H, 4.61; O, 15.67; S, 20.93
CAS #
292605-14-2
Related CAS #
292605-14-2
PubChem CID
9883002
Appearance
White to pink solid powder
Density
1.3±0.1 g/cm3
Boiling Point
501.4±46.0 °C at 760 mmHg
Melting Point
101 °C
Flash Point
257.1±29.0 °C
Vapour Pressure
0.0±1.2 mmHg at 25°C
Index of Refraction
1.628
LogP
3.36
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
5
Heavy Atom Count
20
Complexity
401
Defined Atom Stereocenter Count
0
SMILES
S1C([H])([H])C1([H])C([H])([H])S(C1C([H])=C([H])C(=C([H])C=1[H])OC1C([H])=C([H])C([H])=C([H])C=1[H])(=O)=O
InChi Key
LSONWRHLFZYHIN-UHFFFAOYSA-N
InChi Code
InChI=1S/C15H14O3S2/c16-20(17,11-14-10-19-14)15-8-6-13(7-9-15)18-12-4-2-1-3-5-12/h1-9,14H,10-11H2
Chemical Name
2-[(4-phenoxyphenyl)sulfonylmethyl]thiirane
Synonyms
SB3CT; SB3-CT; 2-[(4-phenoxyphenyl)sulfonylmethyl]thiirane; 2-((4-phenoxyphenylsulfonyl)methyl)thiirane; 2-(((4-Phenoxyphenyl)sulfonyl)methyl)thiirane; (4-phenoxyphenylsulfonyl)methylthiirane; CHEMBL483857; Thiirane, 2-[[(4-phenoxyphenyl)sulfonyl]methyl]-; SB-3CT
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ~61 mg/mL (~199.1 mM)
Water: <1 mg/mL
Ethanol: ~10 mg/mL(~32.6 mM)
Solubility (In Vivo)
Solubility in Formulation 1: 5 mg/mL (16.32 mM) in 10% DMSO 20% Cremophor EL + 70% ddH2O (add these co-solvents sequentially from left to right, and one by one), suspension solution; with sonication.

Solubility in Formulation 2: 2.5 mg/mL (8.16 mM) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (8.16 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.


Solubility in Formulation 4: ≥ 2.5 mg/mL (8.16 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL corn oil and mix evenly.

Solubility in Formulation 5: 4% DMSO+corn oil: 10mg/mL

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.2637 mL 16.3185 mL 32.6371 mL
5 mM 0.6527 mL 3.2637 mL 6.5274 mL
10 mM 0.3264 mL 1.6319 mL 3.2637 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • SB-3CT

    Inhibition of T-cell lymphoma liver metastasis by SB-3CT.Cancer Res.2005 May 1;65(9):3523-6.
  • SB-3CT

    Morphologic appearance and size of T-cell lymphoma metastatic foci of livers from SB-3CT–treated and control mice.Cancer Res.2005 May 1;65(9):3523-6.
  • SB-3CT

    In situ zymography with DQ gelatin.Cancer Res.2005 May 1;65(9):3523-6.
  • SB-3CT

    Survival of control and SB-3CT–treated mice.Cancer Res.2005 May 1;65(9):3523-6.
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