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SR-3029

Alias: SR-3029; SR 3029; SR3029.
Cat No.:V3426 Purity: ≥98%
SR-3029 is a novel,potent, highly kinase selective and ATP competitiveCK1δandCK1ε (casein kinase 1δ/1ε)inhibitor withIC50s of 44 nM and 260 nM, respectively, andKis of 97 nM for both kinases.
SR-3029
SR-3029 Chemical Structure CAS No.: 1454585-06-8
Product category: Casein Kinase
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

SR-3029 is a novel, potent, highly kinase selective and ATP competitive CK1δ and CK1ε (casein kinase 1δ/1ε) inhibitor with IC50s of 44 nM and 260 nM, respectively, and Kis of 97 nM for both kinases. SR-2890 and SR-3029 have IC₅₀ ≤ 50 nM versus CK1δ. The two lead compounds have ≤100 nM EC50 values in MTT assays against the human A375 melanoma cell line and have physical, in vitro and in vivo PK properties suitable for use in proof of principle animal xenograft studies against human cancer cell lines.

Biological Activity I Assay Protocols (From Reference)
ln Vitro
SR-3029 is a strong CK1δ/CK1ε inhibitor, with an IC50 of 44 nM and 260 nM, respectively. SR-3029 exhibits ATP competition, as evidenced by its 97 nM Ki value for CK1δ/CK1ε. Moreover, SR-3029 inhibits FLT3, CDK6/cyclin D1, CDK6/cyclin D1, and CDK4/cyclin D3, with IC50 values of 427, 428, 368, 576, and 3000 nM, respectively. A375 cells are inhibited by SR-3029, with an EC50 of 86 nM[1]. In human breast cancer, CK1δ is a sufficient and essential driver of Wnt/β-catenin signaling. SR-3029 demonstrates negligible efficacy against MCF7, T47D, and MCF10A cell lines, all of which have low levels of CK1δ expression [2].
ln Vivo
at orthotopic MDA-MB-231, MDA-MB-468 (TNBC), SKBR3, and BT474 (HER2+) tumor xenografts, SR-3029 (20 mg/kg ip daily) showed anticancer effects. It was also effective at modest doses and showed no overt harm to rats. In primary patient-derived xenograft (PDX) models, SR-3029 (20 mg/kg ip daily) also significantly reduces tumor growth. Furthermore, SR-3029 (20 mg/kg, intraperitoneal injection) significantly decreased the expression of nuclear β-catenin in mice tumors [2].
References

[1]. Development of highly selective casein kinase 1δ/1ε (CK1δ/ε) inhibitors with potent antiproliferative properties. Bioorg Med Chem Lett. 2013 Aug 1;23(15):4374-80.

[2]. Therapeutic targeting of casein kinase 1δ in breast cancer. Sci Transl Med. 2015 Dec 16;7(318):318ra202.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C23H19F3N8O
Molecular Weight
480.4452
Exact Mass
480.163
Elemental Analysis
C, 57.50; H, 3.99; F, 11.86; N, 23.32; O, 3.33
CAS #
1454585-06-8
PubChem CID
60196195
Appearance
White to pink solid powder
Density
1.6±0.1 g/cm3
Boiling Point
818.7±75.0 °C at 760 mmHg
Flash Point
448.9±37.1 °C
Vapour Pressure
0.0±3.0 mmHg at 25°C
Index of Refraction
1.748
LogP
1.53
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
10
Rotatable Bond Count
5
Heavy Atom Count
35
Complexity
720
Defined Atom Stereocenter Count
0
SMILES
FC1=C(C([H])=C([H])C2=C1N=C(C([H])([H])N([H])C1=C3C(=NC(=N1)N1C([H])([H])C([H])([H])OC([H])([H])C1([H])[H])N(C1C([H])=C([H])C([H])=C(C=1[H])F)C([H])=N3)N2[H])F
InChi Key
CEBMEQPREMCWOL-UHFFFAOYSA-N
InChi Code
InChI=1S/C23H19F3N8O/c24-13-2-1-3-14(10-13)34-12-28-20-21(31-23(32-22(20)34)33-6-8-35-9-7-33)27-11-17-29-16-5-4-15(25)18(26)19(16)30-17/h1-5,10,12H,6-9,11H2,(H,29,30)(H,27,31,32)
Chemical Name
6,7-Difluoro-1H-benzoimidazol-2-ylmethyl)-[9-(3-fluoro-phenyl)-2-morpholin-4-yl-9H-purin-6-yl]-amine
Synonyms
SR-3029; SR 3029; SR3029.
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ≥ 30 mg/mL (~62.44 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (4.33 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (4.33 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.0814 mL 10.4069 mL 20.8138 mL
5 mM 0.4163 mL 2.0814 mL 4.1628 mL
10 mM 0.2081 mL 1.0407 mL 2.0814 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • SR-3029


    CK1δis a clinically relevant and effective target for select breast cancer subtypes.2015 Dec 16;7(318):318ra202.

  • SR-3029


    Modulation of the Wnt/β-catenin pathway is a biomarker for CK1δ activity and inhibition.2015 Dec 16;7(318):318ra202.

  • SR-3029


    Silencing or inhibition of CK1δ provokes breast tumor regression and blocks growth of PDX breast models.2015 Dec 16;7(318):318ra202.

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