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TH5487

Alias: TH 5487; TH5487; TH-5487
Cat No.:V31359 Purity: ≥98%
TH5487 is a novel, potent and selective 8-oxoguanine DNA glycosylase 1 (OGG1) inhibitor with an IC50 of 342 nM.
TH5487
TH5487 Chemical Structure CAS No.: 2304947-71-3
Product category: OGG1
This product is for research use only, not for human use. We do not sell to patients.
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25mg
50mg
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1g
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Product Description

TH5487 is a novel, potent and selective 8-oxoguanine DNA glycosylase 1 (OGG1) inhibitor with an IC50 of 342 nM. TH5487 inhibits DNA repair, prevents OGG1 from identifying its DNA substrate, and alters OGG1 chromatin dynamics, all of which lead to the suppression of genes involved in the proinflammatory pathway.

Biological Activity I Assay Protocols (From Reference)
Targets
OGG1 ( IC50 = 342 nM )
ln Vitro
TH5487 raises the melting temperature of OGG1 in human cells. TH5487 hinders the KBrO3-induced repair of genomic 8-oxoG.In living cells, TH5487 blocks OGG1 from attaching to its genomic substrate.[1]
ln Vivo
In order to evaluate TH5487's potential to downregulate chemotactic (C-C and C-X-C) mediators in vivo, we subject mouse lungs to TNFα challenge and examine the expression of proinflammatory mediators in the gene expression profile. Since TH5487 works well in vivo, it may be possible to treat inflammatory diseases with this substance. [1]
Cell Assay
Cell Line: Murine airway epithelial cell line (MLE 12); Diploid human small-airway epithelial cell (hSAECs)
Concentration: 5 μM
Incubation Time: 1 hour
Result: Inhibited proinflammatory gene expression dose-dependently.
Animal Protocol
mice (50% female and 50% male) of which lungs are TNFα-challenged intranasally (20 ng/ml)
30 mg/kg
IP
References

[1]. Small-molecule inhibitor of OGG1 suppresses proinflammatory gene expression and inflammation. Science. 2018 Nov 16;362(6416):834-839.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C19H18BRIN4O2
Molecular Weight
541.180295467377
Exact Mass
539.97
Elemental Analysis
C, 42.17; H, 3.35; Br, 14.76; I, 23.45; N, 10.35; O, 5.91
CAS #
2304947-71-3
PubChem CID
137321164
Appearance
Light yellow to yellow solid powder
LogP
3.5
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
2
Rotatable Bond Count
2
Heavy Atom Count
27
Complexity
564
Defined Atom Stereocenter Count
0
InChi Key
FZLKVWWPFOLPKF-UHFFFAOYSA-N
InChi Code
InChI=1S/C19H18BrIN4O2/c20-15-2-1-3-16-17(15)23-19(27)25(16)14-8-10-24(11-9-14)18(26)22-13-6-4-12(21)5-7-13/h1-7,14H,8-11H2,(H,22,26)(H,23,27)
Chemical Name
4-(4-bromo-2-oxo-3H-benzimidazol-1-yl)-N-(4-iodophenyl)piperidine-1-carboxamide
Synonyms
TH 5487; TH5487; TH-5487
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 10~25 mg/mL (18.5~46.20 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (3.84 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: 5%DMSO+ Corn oil: 1.5mg/ml (2.77mM)

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.8478 mL 9.2391 mL 18.4781 mL
5 mM 0.3696 mL 1.8478 mL 3.6956 mL
10 mM 0.1848 mL 0.9239 mL 1.8478 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • TH5487 engages OGG1 in cells, inhibits DNA repair, and alters OGG1 chromatin dynamics. Science . 2018 Nov 16;362(6416):834-839.
  • Inhibition of proinflammatory gene expression and inflammation by TH5487, an active site binder of OGG1. Science . 2018 Nov 16;362(6416):834-839.
  • TH5487 suppresses proinflammatory gene expression and lung inflammation in mice. Science . 2018 Nov 16;362(6416):834-839.
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