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Trabectedin

Alias: Trabectedin; ET-743; ET 743; ET743; Ecteinascidin 743
Cat No.:V16679 Purity: ≥98%
Trabectedin (ET743;Ecteinascidin-743; ET-743; trade name Yondelis) is a novel antitumor agent of marine origin with potentin vitro and in vivo antitumour activity.
Trabectedin
Trabectedin Chemical Structure CAS No.: 114899-77-3
Product category: Apoptosis
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
2mg
5mg
10mg
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

Trabectedin (also known as ET743; Ecteinascidin-743; ET-743; trade name Yondelis) is a novel antitumor agent of marine origin with potent in vitro and in vivo antitumour activity. It has been authorized as an antitumor chemotherapy drug as of 2015 for the treatment of ovarian cancer and advanced soft-tissue sarcoma. In both types of breast cancer cells, trabectedin caused cytotoxicity and apoptosis in a time- and concentration-dependent manner.

Biological Activity I Assay Protocols (From Reference)
Targets
MX-1 cells (IC50 = 0.1 nM); MCF7 cells (IC50 = 1.5 nM); MCF7/DXR cells (IC50 = 3.7 nM); Reactive oxygen species (ROS); Apoptosis
ln Vitro
Treatment with trabectedin (ET-743; 10 nM; 24-72 hours; MCF7 cells) causes cell accumulation in the late S to G2 phase[1].
Trabectedin has an IC50 of 0.1 nM, 1.5 nM, and 3.7 nM, respectively, which inhibits the growth of MX-1, MCF7, and MCF7/DXR cells[1].
Trabectedin causes cytotoxicity and apoptosis in both types of breast cancer cells in a manner that depends on both time and concentration. When Trabectedin is applied to MCF-7 cells, the expression levels of the death receptor pathway molecules TRAIL-R1/DR4, TRAIL-R2/DR5, FAS/TNFRSF6, TNF RI/TNFRSF1A, and FADD are significantly increased by 2.6, 3.1, 1.7, 11.2, and 4.0 fold, respectively. Pro-apoptotic proteins Bax, Bad, Cytochrome c, Smac/DIABLO, and cleaved Caspase-3 expression levels are increased by 4.2, 3.6, 4.8, 4.5, and 4.4 fold in MDA-MB-453 cells, whereas anti-apoptotic protein expression levels Bcl-2 and Bcl-XL are decreased by 4.8 and 5.2 fold[2].
Myxoid liposarcoma (MLS) primary tumor cultures and/or cell lines can produce CCL2, CXCL8, IL-6, VEGF, and PTX3 when treated in vitro with noncytotoxic concentrations of Trabectedin[3].
ln Vivo
Treatment with trabectin (ET-743; 30-50 μg/kg; intravenous injection; every three days; female athymic nude mice) increases the antitumor effects in nude mice bearing MX-1 mammary carcinoma xenografts without increasing toxicity[1].
Following Trabectedin treatment, CCL2, CXCL8, CD68+ infiltrating macrophages, CD31+ tumor vessels, and partial decreases in PTX3 are significantly reduced in a xenograft mouse model of human myxoid liposarcoma (MLS)[3].
Cell Assay
Before samples were collected for Western blot analysis, RNAiMax Lipofectamine (4.5 mL per well in a 6-well dish) was added to siRNA targeting the EWS-FLI1 breakpoint site II, complexed, combined with cells, and incubated for 36 to 48 hours.
References

[1]. Sequence-dependent synergistic cytotoxicity of ecteinascidin-743 and NSC 125973 in human breast cancer cell linesin vitro and in vivo. Cancer Res. 2002 Dec 1;62(23):6909-15.

[2]. A diverse induction of apoptosis by trabectedin in MCF-7 (HER2-/ER+) and MDA-MB-453 (HER2+/ER-) breast cancer cells. Toxicol Lett. 2013 Jun 20;221(2):128-136.

[3]. Antitumor and anti-inflammatory effects of trabectedin on human myxoid liposarcoma cells. Cancer Res. 2010 Mar 15;70(6):2235-44.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C39H43N3O11S
Molecular Weight
761.843
Exact Mass
761.2618
Elemental Analysis
C, 61.49; H, 5.69; N, 5.52; O, 23.10; S, 4.21
CAS #
114899-77-3
Related CAS #
Trabectedin-d3
Appearance
Solid powder
SMILES
CC1=CC2=C([C@@H]3[C@@H]4[C@H]5C6=C(C(=C7C(=C6[C@@H](N4[C@H]([C@H](C2)N3C)O)COC(=O)[C@@]8(CS5)C9=CC(=C(C=C9CCN8)O)OC)OCO7)C)OC(=O)C)C(=C1OC)O
InChi Key
PKVRCIRHQMSYJX-RJZIEWFPSA-N
InChi Code
InChI=1S/C39H43N3O11S/c1-16-9-20-10-22-37(46)42-23-13-50-38(47)39(21-12-25(48-5)24(44)11-19(21)7-8-40-39)14-54-36(30(42)29(41(22)4)26(20)31(45)32(16)49-6)28-27(23)35-34(51-15-52-35)17(2)33(28)53-18(3)43/h9,11-12,22-23,29-30,36-37,40,44-46H,7-8,10,13-15H2,1-6H3/t22-,23-,29+,30+,36+,37-,39+/m0/s1
Chemical Name
[(1R,2R,3R,11S,12S,14R,26R)-5,6',12-trihydroxy-6,7'-dimethoxy-7,21,30-trimethyl-27-oxospiro[17,19,28-trioxa-24-thia-13,30-diazaheptacyclo[12.9.6.13,11.02,13.04,9.015,23.016,20]triaconta-4(9),5,7,15,20,22-hexaene-26,1'-3,4-dihydro-2H-isoquinoline]-22-yl] acetate
Synonyms
Trabectedin; ET-743; ET 743; ET743; Ecteinascidin 743
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: (1). This product requires protection from light (avoid light exposure) during transportation and storage.  (2). Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture.  (3). This product is not stable in solution, please use freshly prepared working solution for optimal results.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 33.3~100 mg/mL (43.8~131.3 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (3.28 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (3.28 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (3.28 mM) (saturation unknown) in 5% DMSO + 40% PEG300 + 5% Tween80 + 50% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.3126 mL 6.5631 mL 13.1261 mL
5 mM 0.2625 mL 1.3126 mL 2.6252 mL
10 mM 0.1313 mL 0.6563 mL 1.3126 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT04076579 Active
Recruiting
Drug: Olaparib
Drug: Trabectedin
Sarcoma
Sarcoma Metastatic
University of Michigan
Rogel Cancer Center
March 17, 2020 Phase 2
NCT03985722 Active
Recruiting
Drug: Olaratumab and
Trabectedin
Sarcoma, Soft Tissuec Grupo Espanol de Investigacion
en Sarcomas
September 21, 2018 Phase 1
NCT04979442 Active
Recruiting
Drug: RAIN-32
Drug: Trabectedin
Dedifferentiated Liposarcoma Rain Oncology Inc July 14, 2021 Phase 3
NCT02359474 Active
Recruiting
Genetic: DNA double-strand
breaks
Drug: Trabectedin
Sarcoma Ludwig-Maximilians -
University of Munich
December 19, 2014 Phase 2
NCT03127215 Active
Recruiting
Drug: Olaparib
Drug: Trabectedin
Cancers With DNA Repair-
Deficiency
National Center for Tumor
Diseases, Heidelberg
October 25, 2018 Phase 2
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